RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PUS7LQ9H0K6 701 aaKnown RBP19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 LMTK2Q8IWU2 1503 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 FOXP4Q8IVH2 680 aaPredicted RBP19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 HACE1Q8IYU2 909 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 EEF2P13639 858 aaKnown RBP19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 KRT5P13647 590 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 INF2Q27J81 1249 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 CCDC117Q8IWD4 279 aaPredicted RBP19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 SP8Q8IXZ3 490 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 BLIDQ8IZY5 108 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 GPBP1L1Q9HC44 474 aaPredicted RBP19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 KRT19P08727 400 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 PTPN14Q15678 1187 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 PNMA3Q9UL41 463 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.17■□□□□ 0.661e-8■■■□□ 18.5
SMARCA4-203ENST00000429416 STK24Q9Y6E0 443 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 PIK3C2BO00750 1634 aa19.17■□□□□ 0.66
SMARCA4-203ENST00000429416 POLR2DO15514 142 aaKnown RBP19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 GH2P01242 217 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 ASNSP08243 561 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 DEPTORQ8TB45 409 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 KDM2BQ8NHM5 1336 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 URI1O94763 535 aaPredicted RBP19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 LMAN1P49257 510 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 SLC8A3P57103 927 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 ADD3Q9UEY8 706 aaKnown RBP19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 KCNH3Q9ULD8 1083 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 E9PCH4 1651 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 FAM196BA6NMK8 535 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 PCP11498 1178 aaKnown RBP19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 STAT2P52630 851 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 GTPBP4Q9BZE4 634 aaKnown RBP19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 MED23Q9ULK4 1368 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 ERLIN1O75477 346 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 SCG2P13521 617 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 FAM102BQ5T8I3 360 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 CABP7Q86V35 215 aa19.16■□□□□ 0.66
SMARCA4-203ENST00000429416 NEK11Q8NG66 645 aa19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 IQSEC2Q5JU85 1478 aa19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 XKR9Q5GH70 373 aa19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 SH3RF3Q8TEJ3 882 aaPredicted RBP19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 ELP1O95163 1332 aa19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 UBXN1Q04323 297 aa19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 ITPK1Q13572 414 aa19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 MSANTD4Q8NCY6 345 aa19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 GCNT3O95395 438 aa19.15■□□□□ 0.66
SMARCA4-203ENST00000429416 DDAH1O94760 285 aa19.14■□□□□ 0.66
SMARCA4-203ENST00000429416 CASQ1P31415 396 aa19.14■□□□□ 0.66
SMARCA4-203ENST00000429416 KLHL40Q2TBA0 621 aa19.14■□□□□ 0.66
SMARCA4-203ENST00000429416 MRPL44Q9H9J2 332 aaKnown RBP19.14■□□□□ 0.66
SMARCA4-203ENST00000429416 PCDHA12Q9UN75 941 aa19.14■□□□□ 0.66
SMARCA4-203ENST00000429416 CROCC2H7BZ55 1655 aa19.14■□□□□ 0.66
SMARCA4-203ENST00000429416 GSDMDP57764 484 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 ASPRV1Q53RT3 343 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 CNNM4Q6P4Q7 775 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 OTUD5Q96G74 571 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 ADCY5O95622 1261 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 DPEP1P16444 411 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 MCAMP43121 646 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 APOBEC3FQ8IUX4 373 aaKnown RBP19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 ERCC3P19447 782 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 ATL3Q6DD88 541 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 STAMQ92783 540 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 OSBP2Q969R2 916 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 ISCA1Q9BUE6 129 aa19.14■□□□□ 0.65
SMARCA4-203ENST00000429416 TMEM110-MUSTN1A8MSY1 372 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 ZNRF3Q9ULT6 936 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 NELFCDQ8IXH7 590 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 MICALL2Q8IY33 904 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 NACA2Q9H009 215 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 TECP42680 631 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 CDK8P49336 464 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 ZSCAN23Q3MJ62 389 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 SLC16A10Q8TF71 515 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 JADE2Q9NQC1 790 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 BRPF3Q9ULD4 1205 aa19.13■□□□□ 0.65
SMARCA4-203ENST00000429416 MCTP2Q6DN12 878 aa19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 TEKT3Q9BXF9 490 aa19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 EXOC3O60645 756 aa19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 TMOD1P28289 359 aa19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 USP17L2Q6R6M4 530 aa19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 ZNF589Q86UQ0 364 aaPredicted RBP19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 CNOT7Q9UIV1 285 aaKnown RBP19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 CDHR2Q9BYE9 1310 aa19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 CCDC113Q9H0I3 377 aa19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
SMARCA4-203ENST00000429416 CYLC1P35663 651 aaPredicted RBP19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 IFI16Q16666 785 aaKnown RBP19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 DDX25Q9UHL0 483 aaKnown RBP19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 CSPG5O95196 566 aa19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 ME3Q16798 604 aa19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 ZNF771Q7L3S4 317 aaPredicted RBP19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 NEK8Q86SG6 692 aa19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 ZBTB8OSQ8IWT0 167 aa19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 CTNND2Q9UQB3 1225 aa19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 FBXO41Q8TF61 875 aa19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 CETN3O15182 167 aa19.11■□□□□ 0.65
SMARCA4-203ENST00000429416 RNF34Q969K3 372 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms