RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 RNASE9P60153 205 aaKnown RBP14.1□□□□□ -0.15
CDH3-202ENST00000429102 ERVK-24P63145 666 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 ATP2B2Q01814 1243 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 RABGGTAQ92696 567 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 CNNM2Q9H8M5 875 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 BRMS1Q9HCU9 246 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 TCRBV5S4A2TA0A5A2 114 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 ZNF185O15231 689 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 GOLGA8HP0CJ92 632 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 TBX2Q13207 712 aaPredicted RBP14.1□□□□□ -0.15
CDH3-202ENST00000429102 PTPROQ16827 1216 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 ENAHQ8N8S7 591 aaPredicted RBP14.1□□□□□ -0.15
CDH3-202ENST00000429102 ANKRD20A12PQ8NF67 263 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 SLC4A9Q96Q91 983 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 GNL3LQ9NVN8 582 aaKnown RBP14.1□□□□□ -0.15
CDH3-202ENST00000429102 CDC23Q9UJX2 597 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 DUSP10Q9Y6W6 482 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 GOLGA6L9A6NEM1 432 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 LIFRP42702 1097 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 SGMS1Q86VZ5 419 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 IQCA1Q86XH1 822 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 TRIM47Q96LD4 638 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 ANKZF1Q9H8Y5 726 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 TSPY2A6NKD2 308 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 MFAP3LO75121 409 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 CXCR5P32302 372 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 CCDC122Q5T0U0 273 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 SMCR8Q8TEV9 937 aaPredicted RBP14.09□□□□□ -0.15
CDH3-202ENST00000429102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDH3-202ENST00000429102 CRYBG1Q9Y4K1 1723 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 RAD21O60216 631 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 RASGRP2Q7LDG7 609 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 NAPGQ99747 312 aaPredicted RBP14.09□□□□□ -0.15
CDH3-202ENST00000429102 FOXP1Q9H334 677 aaPredicted RBP14.09□□□□□ -0.15
CDH3-202ENST00000429102 SMARCAL1Q9NZC9 954 aa14.09□□□□□ -0.15
CDH3-202ENST00000429102 ADD3Q9UEY8 706 aaKnown RBP14.09□□□□□ -0.15
CDH3-202ENST00000429102 KCNJ18B7U540 433 aa14.08□□□□□ -0.15
CDH3-202ENST00000429102 STAT6P42226 847 aa14.08□□□□□ -0.15
CDH3-202ENST00000429102 KCNJ12Q14500 433 aa14.08□□□□□ -0.15
CDH3-202ENST00000429102 CCDC178Q5BJE1 867 aa14.08□□□□□ -0.15
CDH3-202ENST00000429102 TXLNBQ8N3L3 684 aa14.08□□□□□ -0.15
CDH3-202ENST00000429102 GOLGA6L1Q8N7Z2 621 aa14.08□□□□□ -0.15
CDH3-202ENST00000429102 CTCFLQ8NI51 663 aaPredicted RBP14.08□□□□□ -0.15
CDH3-202ENST00000429102 STX8Q9UNK0 236 aa14.08□□□□□ -0.15
CDH3-202ENST00000429102 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
CDH3-202ENST00000429102 A0A1B0GTH6 734 aa14.08□□□□□ -0.16
CDH3-202ENST00000429102 TRIM21P19474 475 aaKnown RBP14.08□□□□□ -0.16
CDH3-202ENST00000429102 CHRNDQ07001 517 aa14.08□□□□□ -0.16
CDH3-202ENST00000429102 ERLIN1O75477 346 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 KANK3Q6NY19 840 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 RSRC2Q7L4I2 434 aaKnown RBP14.07□□□□□ -0.16
CDH3-202ENST00000429102 FAM53CQ9NYF3 392 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 B4DLN1 442 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 PPP1R3GB7ZBB8 358 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 PRCPP42785 496 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 COPB1P53618 953 aaKnown RBP14.07□□□□□ -0.16
CDH3-202ENST00000429102 PAK1Q13153 545 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 HDXQ7Z353 690 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 CADPS2Q86UW7 1296 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 ZSCAN10Q96SZ4 725 aaPredicted RBP14.07□□□□□ -0.16
CDH3-202ENST00000429102 TTC26A0AVF1 554 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 CASP8Q14790 479 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 KRT26Q7Z3Y9 468 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 HEATR3Q7Z4Q2 680 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 SLC51AQ86UW1 340 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 IQUBQ8NA54 791 aa14.07□□□□□ -0.16
CDH3-202ENST00000429102 RNF41Q9H4P4 317 aaPredicted RBP14.07□□□□□ -0.16
CDH3-202ENST00000429102 RGPD5Q99666 1765 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 C5P01031 1676 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 ADAMTS2O95450 1211 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 ATP6V1AP38606 617 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 SARSP49591 514 aaKnown RBP14.06□□□□□ -0.16
CDH3-202ENST00000429102 PMS1P54277 932 aaKnown RBP14.06□□□□□ -0.16
CDH3-202ENST00000429102 CEP112Q8N8E3 955 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 VGLL2Q8N8G2 317 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 KLRK1P26718 216 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 SLC7A5Q01650 507 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.06□□□□□ -0.16
CDH3-202ENST00000429102 CNGA4Q8IV77 575 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 SRBD1Q8N5C6 995 aaKnown RBP14.06□□□□□ -0.16
CDH3-202ENST00000429102 KCND1Q9NSA2 647 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 ABHD10Q9NUJ1 306 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 AGPAT5Q9NUQ2 364 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 MYO6Q9UM54 1294 aa14.06□□□□□ -0.16
CDH3-202ENST00000429102 LRRIQ3A6PVS8 624 aaPredicted RBP14.05□□□□□ -0.16
CDH3-202ENST00000429102 ATP1A1P05023 1023 aaKnown RBP14.05□□□□□ -0.16
CDH3-202ENST00000429102 PKN1Q16512 942 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 INF2Q27J81 1249 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 FBXL16Q8N461 479 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 DYNLL2Q96FJ2 89 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 FAM204AQ9H8W3 233 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 EPN1Q9Y6I3 576 aaPredicted RBP14.05□□□□□ -0.16
CDH3-202ENST00000429102 XDHP47989 1333 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 IPO7O95373 1038 aaKnown RBP14.05□□□□□ -0.16
CDH3-202ENST00000429102 UBA7P41226 1012 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 EHD2Q9NZN4 543 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 MAGEC2Q9UBF1 373 aaPredicted RBP14.05□□□□□ -0.16
CDH3-202ENST00000429102 LUC7L2Q9Y383 392 aaKnown RBP14.05□□□□□ -0.16
CDH3-202ENST00000429102 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
CDH3-202ENST00000429102 RIC1Q4ADV7 1423 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms