RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 COL6A1P12109 1028 aa13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 MAP2K5Q13163 448 aa13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 ZNF697Q5TEC3 545 aa13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 FAM161BQ96MY7 647 aa13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 HAUS7Q99871 368 aa13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 SAP30BPQ9UHR5 308 aaKnown RBP13.1□□□□□ -0.31
APOBEC3C-202ENST00000428892 TCRBV5S4A2TA0A5A2 114 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 GOLIM4O00461 696 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 IDH1O75874 414 aaKnown RBP13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 USP14P54578 494 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 Q3C1V9 767 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 SMC5Q8IY18 1101 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 DNAJC18Q9H819 358 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
APOBEC3C-202ENST00000428892 USP17L15C9J2P7 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP17L13C9JLJ4 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP17L11C9JVI0 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP17L18D6R9N7 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP17L22D6RA61 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP17L17D6RBQ6 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP17L19D6RCP7 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP17L20D6RJB6 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 CYP7A1P22680 504 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP5P45974 858 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP17L24Q0WX57 530 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 MAP3K12Q12852 859 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 RAB3GAP1Q15042 981 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 MORN1Q5T089 497 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 LHX8Q68G74 356 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 MAGEB6Q8N7X4 407 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 DNAJC2Q99543 621 aaKnown RBP13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 PAG1Q9NWQ8 432 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 DDX20Q9UHI6 824 aaKnown RBP13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 RABGAP1Q9Y3P9 1069 aa13.08□□□□□ -0.32
APOBEC3C-202ENST00000428892 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 GH2P01242 217 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 IGHDP01880 384 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 PDE6AP16499 860 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 SHROOM1Q2M3G4 852 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 USP6NLQ92738 828 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 COL25A1Q9BXS0 654 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 PRDM5Q9NQX1 630 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 ATP11BQ9Y2G3 1177 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 ZNFX1Q9P2E3 1918 aaKnown RBP13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 TTC41PQ6P2S7 1318 aa13.07□□□□□ -0.32
APOBEC3C-202ENST00000428892 ZNF236Q9UL36 1845 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 SLC15A5A6NIM6 579 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 DNM1LO00429 736 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 JAG1P78504 1218 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 TSHZ3Q63HK5 1081 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 CERS3Q8IU89 383 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 LPAR1Q92633 364 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 CUL9Q8IWT3 2517 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 PLXNA1Q9UIW2 1896 aa13.06□□□□□ -0.32
APOBEC3C-202ENST00000428892 VCAM1P19320 739 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 PTPREP23469 700 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 ADD2P35612 726 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 RTP1P59025 263 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 ABCB5Q2M3G0 1257 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 CERKLQ49MI3 558 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 SLC9C2Q5TAH2 1124 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 ANKRD45Q5TZF3 282 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 FAM109BQ6ICB4 259 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 METTL16Q86W50 562 aaKnown RBP13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 C12orf42Q96LP6 360 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 GUCD1Q96NT3 240 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 SERPINB13Q9UIV8 391 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 UNC80Q8N2C7 3258 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 ZNF532Q9HCE3 1301 aa13.05□□□□□ -0.32
APOBEC3C-202ENST00000428892 CHGBP05060 677 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 CYP2C19P33261 490 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 IRX6P78412 446 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 ARRDC4Q8NCT1 418 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 RPAP3Q9H6T3 665 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 FLRT1Q9NZU1 646 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 A0A0G2JMZ2 1700 aa13.04□□□□□ -0.32
APOBEC3C-202ENST00000428892 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms