RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 BLZF1Q9H2G9 400 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 DDX4Q9NQI0 724 aaKnown RBP12.59□□□□□ -0.39
HIPK2-203ENST00000428878 PCDHB6Q9Y5E3 794 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 LRP5O75197 1615 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 FOXP2O15409 715 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 ABCB5Q2M3G0 1257 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 DLK2Q6UY11 383 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 ZNF384Q8TF68 577 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 SAMM50Q9Y512 469 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 LAMB4A4D0S4 1761 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 NBPF9Q3BBW0 867 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
HIPK2-203ENST00000428878 C12orf60Q5U649 245 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 LRSAM1Q6UWE0 723 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 SUPT20HQ8NEM7 779 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 GJA10Q969M2 543 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
HIPK2-203ENST00000428878 H7C1D1 291 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 NDUFA8P51970 172 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 TYRO3Q06418 890 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 NSMFQ6X4W1 530 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 NBPF11Q86T75 865 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 AOPEPQ8N6M6 819 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 GOLGA6L6A8MZA4 724 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 HOXA13P31271 388 aaPredicted RBP12.58□□□□□ -0.4
HIPK2-203ENST00000428878 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
HIPK2-203ENST00000428878 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 MAEAQ7L5Y9 396 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 RPAP1Q9BWH6 1393 aaPredicted RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 DDTLA6NHG4 134 aaPredicted RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 ADCY5O95622 1261 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 KIF23Q02241 960 aaPredicted RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 PNOCQ13519 176 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 NOSTRINQ8IVI9 506 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 TACC3Q9Y6A5 838 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 SCG2P13521 617 aa12.57□□□□□ -0.4
HIPK2-203ENST00000428878 TRMT44Q8IYL2 757 aaKnown RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 HOOK1Q9UJC3 728 aaKnown RBP12.57□□□□□ -0.4
HIPK2-203ENST00000428878 RESTQ13127 1097 aa12.56□□□□□ -0.4
HIPK2-203ENST00000428878 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
HIPK2-203ENST00000428878 KCNG4Q8TDN1 519 aa12.56□□□□□ -0.4
HIPK2-203ENST00000428878 TTC12Q9H892 705 aaPredicted RBP12.56□□□□□ -0.4
HIPK2-203ENST00000428878 TTC38Q5R3I4 469 aa12.56□□□□□ -0.4
HIPK2-203ENST00000428878 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
HIPK2-203ENST00000428878 C17orf53Q8N3J3 647 aaPredicted RBP12.56□□□□□ -0.4
HIPK2-203ENST00000428878 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
HIPK2-203ENST00000428878 CCDC178Q5BJE1 867 aa12.56□□□□□ -0.4
HIPK2-203ENST00000428878 ZNF202O95125 648 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 EEF2P13639 858 aaKnown RBP12.55□□□□□ -0.4
HIPK2-203ENST00000428878 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 C6orf50Q9HD87 102 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 DOT1LQ8TEK3 1739 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L15C9J2P7 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L10C9JJH3 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L13C9JLJ4 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L11C9JVI0 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L18D6R9N7 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L22D6RA61 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L17D6RBQ6 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L19D6RCP7 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L20D6RJB6 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 GNAQP50148 359 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L24Q0WX57 530 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 PTGDRQ13258 359 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 RTKN2Q8IZC4 609 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 RTFDC1Q9BY42 306 aaPredicted RBP12.55□□□□□ -0.4
HIPK2-203ENST00000428878 DDX19AQ9NUU7 478 aaKnown RBP12.55□□□□□ -0.4
HIPK2-203ENST00000428878 TBC1D7Q9P0N9 293 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 EPB41L2O43491 1005 aaKnown RBP12.55□□□□□ -0.4
HIPK2-203ENST00000428878 RASA1P20936 1047 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 CXCL9Q07325 125 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 SMYD4Q8IYR2 804 aaPredicted RBP12.55□□□□□ -0.4
HIPK2-203ENST00000428878 CEP131Q9UPN4 1083 aa12.55□□□□□ -0.4
HIPK2-203ENST00000428878 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
HIPK2-203ENST00000428878 EPSTI1Q96J88 318 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 PAGR1Q9BTK6 254 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 RBM28Q9NW13 759 aaKnown RBP12.54□□□□□ -0.4
HIPK2-203ENST00000428878 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 KCNH3Q9ULD8 1083 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 PCDHA1Q9Y5I3 950 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 MYCLP12524 364 aaPredicted RBP12.54□□□□□ -0.4
HIPK2-203ENST00000428878 ALAS1P13196 640 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 PFKFB1P16118 471 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 TECP42680 631 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 LIFRP42702 1097 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 DYMQ7RTS9 669 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
HIPK2-203ENST00000428878 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
HIPK2-203ENST00000428878 TUBGCP6Q96RT7 1819 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms