RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 DCPSQ96C86 337 aaKnown RBP14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 LZTS2Q9BRK4 669 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 SLC26A6Q9BXS9 759 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 RNF26Q9BY78 433 aaPredicted RBP14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 GINM1Q9NU53 330 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 MAD2L2Q9UI95 211 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 SCAF8Q9UPN6 1271 aaKnown RBP14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 PALM3A6NDB9 673 aaPredicted RBP14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 PHF20L1A8MW92 1017 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 PRPF3O43395 683 aaKnown RBP14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 PPFIA3O75145 1194 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 DEXIO95424 95 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 PARP1P09874 1014 aaKnown RBP14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 SMARCA1P28370 1054 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 EPHX2P34913 555 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 CAP2P40123 477 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 JAG1P78504 1218 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 AKAP17AQ02040 695 aaKnown RBP14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 ICA1Q05084 483 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 FUT2Q10981 343 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 SUPT20HL1Q3ZLR7 823 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 NBPF12Q5TAG4 269 aaPredicted RBP14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 CLEC10AQ8IUN9 316 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 C8orf76Q96K31 380 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 GBP4Q96PP9 640 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 RBM27Q9P2N5 1060 aaKnown RBP14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 ATP6V1DQ9Y5K8 247 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 SRCAPQ6ZRS2 3230 aa14.76□□□□□ -0.05
HMGB3P4-201ENST00000428776 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 CTNND1O60716 968 aaKnown RBP14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 PLEKHA8P1O95397 391 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 F13A1P00488 732 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 ASNSP08243 561 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 SNHG28P0DPA3 235 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 ATP2B2Q01814 1243 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 SHROOM1Q2M3G4 852 aaPredicted RBP14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 ASPRV1Q53RT3 343 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 SIAH1Q8IUQ4 282 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 CMTR1Q8N1G2 835 aaKnown RBP14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 CCDC82Q8N4S0 544 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 SRBD1Q8N5C6 995 aaKnown RBP14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 ALG1Q9BT22 464 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 ZNF341Q9BYN7 854 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 ZBTB21Q9ULJ3 1066 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 PHIPQ8WWQ0 1821 aa14.75□□□□□ -0.05
HMGB3P4-201ENST00000428776 CNTNAP5Q8WYK1 1306 aa14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 USP17L5A8MUK1 530 aa14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 PDHBP11177 359 aa14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 FOXD4L5Q5VV16 416 aaPredicted RBP14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 CDC37L1Q7L3B6 337 aa14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 PNMA8AQ86V59 439 aaPredicted RBP14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 SULF1Q8IWU6 871 aa14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 LRRC47Q8N1G4 583 aaKnown RBP14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 STAG2Q8N3U4 1231 aa14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 FBXO18Q8NFZ0 1043 aa14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 FOXD4L4Q8WXT5 416 aaPredicted RBP14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 ARHGEF10LQ9HCE6 1279 aa14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 V9GY48 417 aaPredicted RBP14.74□□□□□ -0.05
HMGB3P4-201ENST00000428776 KLRF2D3W0D1 207 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 BAG4O95429 457 aaKnown RBP14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 TRIM29Q14134 588 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 NFKBIBQ15653 356 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 GPATCH4Q5T3I0 446 aaKnown RBP14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 USP17L2Q6R6M4 530 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 GMCL1P1Q8NEA9 526 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 DCAF4Q8WV16 495 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 SPZ1Q9BXG8 430 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 ZSCAN16Q9H4T2 348 aaPredicted RBP14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 TAF1DQ9H5J8 278 aaPredicted RBP14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 ZNF112Q9UJU3 913 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 MTMR7Q9Y216 660 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 OTOFQ9HC10 1997 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 PAPPA2Q9BXP8 1791 aa14.73□□□□□ -0.05
HMGB3P4-201ENST00000428776 POTECB2RU33 542 aa14.72□□□□□ -0.05
HMGB3P4-201ENST00000428776 XBP1P17861 261 aa14.72□□□□□ -0.05
HMGB3P4-201ENST00000428776 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
HMGB3P4-201ENST00000428776 SH2D4AQ9H788 454 aa14.72□□□□□ -0.05
HMGB3P4-201ENST00000428776 F5H6K3 240 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 GOLGA8HP0CJ92 632 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 MCM4P33991 863 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 FOSBP53539 338 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 KLRC3Q07444 240 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 PKN1Q16512 942 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 PFKFB3Q16875 520 aaPredicted RBP14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 PRAMEF18Q5VWM3 479 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 SLFN13Q68D06 897 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 KRT40Q6A162 431 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 KRT26Q7Z3Y9 468 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 USP48Q86UV5 1035 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 GMCL1Q96IK5 515 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 AIFM3Q96NN9 605 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 GOPCQ9HD26 462 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 TMX2Q9Y320 296 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 SSC5DA1L4H1 1573 aa14.71□□□□□ -0.05
HMGB3P4-201ENST00000428776 A0A1W2PRG0 241 aa14.7□□□□□ -0.06
HMGB3P4-201ENST00000428776 UBE2Q2LH0YL09 131 aa14.7□□□□□ -0.06
HMGB3P4-201ENST00000428776 GOLGA6L22H0YM25 854 aa14.7□□□□□ -0.06
HMGB3P4-201ENST00000428776 SCG2P13521 617 aa14.7□□□□□ -0.06
HMGB3P4-201ENST00000428776 SLC1A4P43007 532 aa14.7□□□□□ -0.06
HMGB3P4-201ENST00000428776 GUCY1B3Q02153 619 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms