RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 DCAF15Q66K64 600 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 SULF1Q8IWU6 871 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 FANCBQ8NB91 859 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 SMC1BQ8NDV3 1235 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 DDX11Q96FC9 970 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 CHMP5Q9NZZ3 219 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
CRIM1-204ENST00000428774 PASKQ96RG2 1323 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 STK36Q9NRP7 1315 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 CPLX1O14810 134 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 FDPSP14324 419 aaKnown RBP12.64□□□□□ -0.39
CRIM1-204ENST00000428774 INPP5BP32019 993 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
CRIM1-204ENST00000428774 PRKG1Q13976 671 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 TMTC3Q6ZXV5 915 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 MOB2Q70IA6 237 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 CDC37L1Q7L3B6 337 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
CRIM1-204ENST00000428774 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
CRIM1-204ENST00000428774 ZNF341Q9BYN7 854 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 CABP5Q9NP86 173 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
CRIM1-204ENST00000428774 CLIP2Q9UDT6 1046 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 LOC285556D6RIA3 1793 aa12.64□□□□□ -0.39
CRIM1-204ENST00000428774 DHX16O60231 1041 aaKnown RBP12.63□□□□□ -0.39
CRIM1-204ENST00000428774 SNHG28P0DPA3 235 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 IFNAR1P17181 557 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 ATP2B2Q01814 1243 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 FUT2Q10981 343 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 SLC35G1Q2M3R5 365 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 PPP4R3BQ5MIZ7 849 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 CMTR1Q8N1G2 835 aaKnown RBP12.63□□□□□ -0.39
CRIM1-204ENST00000428774 PHKBQ93100 1093 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 CHMP4CQ96CF2 233 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 MAP3K14Q99558 947 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 ZNF112Q9UJU3 913 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 ZDHHC9Q9Y397 364 aa12.63□□□□□ -0.39
CRIM1-204ENST00000428774 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 USP17L5A8MUK1 530 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 CDKL5O76039 1030 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
CRIM1-204ENST00000428774 PDHBP11177 359 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 SYT1P21579 422 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 ECE1P42892 770 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 FOSBP53539 338 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 PPP2R5BQ15173 497 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 CST9Q5W186 159 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
CRIM1-204ENST00000428774 STAG2Q8N3U4 1231 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 MKL1Q969V6 931 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 WRNIP1Q96S55 665 aa12.62□□□□□ -0.39
CRIM1-204ENST00000428774 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
CRIM1-204ENST00000428774 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
CRIM1-204ENST00000428774 CCDC196A0A1B0GTZ2 297 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 PALM3A6NDB9 673 aaPredicted RBP12.61□□□□□ -0.39
CRIM1-204ENST00000428774 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
CRIM1-204ENST00000428774 CELF2O95319 508 aaKnown RBP12.61□□□□□ -0.39
CRIM1-204ENST00000428774 BRD1O95696 1058 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 ASNSP08243 561 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 GOLGA8HP0CJ92 632 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 KIF5BP33176 963 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 HTRA3P83110 453 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 SUPT20HL1Q3ZLR7 823 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 USP17L2Q6R6M4 530 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 SCYL3Q8IZE3 742 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
CRIM1-204ENST00000428774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.61□□□□□ -0.39
CRIM1-204ENST00000428774 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 AIFM3Q96NN9 605 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 SLC26A6Q9BXS9 759 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 RNF26Q9BY78 433 aaPredicted RBP12.61□□□□□ -0.39
CRIM1-204ENST00000428774 ARHGEF10LQ9HCE6 1279 aa12.61□□□□□ -0.39
CRIM1-204ENST00000428774 STX6O43752 255 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
CRIM1-204ENST00000428774 PARP1P09874 1014 aaKnown RBP12.6□□□□□ -0.39
CRIM1-204ENST00000428774 NUCB2P80303 420 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 ZNF543Q08ER8 600 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 FSTL1Q12841 308 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 ASPRV1Q53RT3 343 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 NOL9Q5SY16 702 aaKnown RBP12.6□□□□□ -0.39
CRIM1-204ENST00000428774 CCDC82Q8N4S0 544 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 FAM184AQ8NB25 1140 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 GMCL1P1Q8NEA9 526 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 CPVLQ9H3G5 476 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.6□□□□□ -0.39
CRIM1-204ENST00000428774 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 MTMR6Q9Y217 621 aa12.6□□□□□ -0.39
CRIM1-204ENST00000428774 RBBP6Q7Z6E9 1792 aaKnown RBP12.59□□□□□ -0.39
CRIM1-204ENST00000428774 VPS37CA5D8V6 355 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms