RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 SBK1Q52WX2 424 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 FAM47AQ5JRC9 791 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 SAMD1Q6SPF0 538 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-216ENST00000428482 CENPQQ7L2Z9 268 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-216ENST00000428482 TBC1D10CQ8IV04 446 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 NAPBQ9H115 298 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 CABP5Q9NP86 173 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 FBXO28Q9NVF7 368 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 BTBD7Q9P203 1132 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
HDLBP-216ENST00000428482 MCM3APO60318 1980 aa12.23□□□□□ -0.45
HDLBP-216ENST00000428482 IGKV6D-41A0A0C4DH26 115 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 NMT2O60551 498 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 HAND2P61296 217 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 ERVK-24P63145 666 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 Q3C1V9 767 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 TANGO6Q9C0B7 1094 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 GINM1Q9NU53 330 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 MORF4L1Q9UBU8 362 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 PDE4DIPQ5VU43 2346 aa12.22□□□□□ -0.45
HDLBP-216ENST00000428482 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
HDLBP-216ENST00000428482 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 ZNFX1Q9P2E3 1918 aaKnown RBP12.21□□□□□ -0.45
HDLBP-216ENST00000428482 HOXA7P31268 230 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-216ENST00000428482 FLT3LGP49771 235 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 KIF22Q14807 665 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 AMOTL1Q8IY63 956 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 ATG4CQ96DT6 458 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 CEP95Q96GE4 821 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 VCPKMTQ9H867 229 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 RBPJLQ9UBG7 517 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 LAMA3Q16787 3333 aa12.21□□□□□ -0.45
HDLBP-216ENST00000428482 C19orf81C9J6K1 198 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 RAD21O60216 631 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 INHAP05111 366 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 GNAT2P19087 354 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 EN2P19622 333 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-216ENST00000428482 SDSP20132 328 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 FAM83BQ5T0W9 1011 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 GIMAP6Q6P9H5 292 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 CWC27Q6UX04 472 aaKnown RBP12.2□□□□□ -0.46
HDLBP-216ENST00000428482 CATSPERGQ6ZRH7 1159 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 RAET1EQ8TD07 263 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 TRIB2Q92519 343 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 DDRGK1Q96HY6 314 aa12.2□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L15C9J2P7 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 PATL2C9JE40 543 aaKnown RBP12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L13C9JLJ4 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L11C9JVI0 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L18D6R9N7 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L22D6RA61 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L17D6RBQ6 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L19D6RCP7 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L20D6RJB6 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 NDUFB10O96000 172 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 HSPD1P10809 573 aaKnown RBP12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP14P54578 494 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 USP17L24Q0WX57 530 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-216ENST00000428482 CCL14Q16627 93 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 ARHGEF10LQ9HCE6 1279 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 HELLSQ9NRZ9 838 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 TMX2Q9Y320 296 aa12.19□□□□□ -0.46
HDLBP-216ENST00000428482 ZMYM6O95789 1325 aa12.18□□□□□ -0.46
HDLBP-216ENST00000428482 GRK4P32298 578 aa12.18□□□□□ -0.46
HDLBP-216ENST00000428482 GCLCP48506 637 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-216ENST00000428482 RGS19P49795 217 aa12.18□□□□□ -0.46
HDLBP-216ENST00000428482 MCMDC2Q4G0Z9 681 aa12.18□□□□□ -0.46
HDLBP-216ENST00000428482 GPR142Q7Z601 462 aa12.18□□□□□ -0.46
HDLBP-216ENST00000428482 MKNK2Q9HBH9 465 aa12.18□□□□□ -0.46
HDLBP-216ENST00000428482 TAF6LQ9Y6J9 622 aa12.18□□□□□ -0.46
HDLBP-216ENST00000428482 LAMA2P24043 3122 aaKnown RBP12.17□□□□□ -0.46
HDLBP-216ENST00000428482 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
HDLBP-216ENST00000428482 ADCY3O60266 1144 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 FLOT1O75955 427 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 CYP2B6P20813 491 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 LRRFIP1Q32MZ4 808 aaKnown RBP12.17□□□□□ -0.46
HDLBP-216ENST00000428482 WDR78Q5VTH9 848 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 REPS2Q8NFH8 660 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 CCDC17Q96LX7 622 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 DIAPH3Q9NSV4 1193 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 FLRT1Q9NZU1 646 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 GJD2Q9UKL4 321 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 MYH6P13533 1939 aa12.17□□□□□ -0.46
HDLBP-216ENST00000428482 FGAP02671 866 aa12.16□□□□□ -0.46
HDLBP-216ENST00000428482 CCL5P13501 91 aa12.16□□□□□ -0.46
HDLBP-216ENST00000428482 MLLT1Q03111 559 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-216ENST00000428482 TMEM132BQ14DG7 1078 aa12.16□□□□□ -0.46
HDLBP-216ENST00000428482 RRP12Q5JTH9 1297 aaKnown RBP12.16□□□□□ -0.46
HDLBP-216ENST00000428482 LBX2Q6XYB7 198 aa12.16□□□□□ -0.46
HDLBP-216ENST00000428482 SLAIN1Q8ND83 568 aa12.16□□□□□ -0.46
HDLBP-216ENST00000428482 GPRC5AQ8NFJ5 357 aa12.16□□□□□ -0.46
HDLBP-216ENST00000428482 MOV10L1Q9BXT6 1211 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms