RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TTF1Q15361 905 aaPredicted RBP20.05■□□□□ 0.8
VARS-216ENST00000428445 ANO1Q5XXA6 986 aa20.05■□□□□ 0.8
VARS-216ENST00000428445 SAMD1Q6SPF0 538 aaPredicted RBP20.05■□□□□ 0.8
VARS-216ENST00000428445 LBX2Q6XYB7 198 aa20.05■□□□□ 0.8
VARS-216ENST00000428445 SIAH1Q8IUQ4 282 aa20.05■□□□□ 0.8
VARS-216ENST00000428445 TDHQ8IZJ6 230 aa20.05■□□□□ 0.8
VARS-216ENST00000428445 MOV10L1Q9BXT6 1211 aaKnown RBP20.05■□□□□ 0.8
VARS-216ENST00000428445 BOLA2Q9H3K6 86 aa20.05■□□□□ 0.8
VARS-216ENST00000428445 RLFQ13129 1914 aa20.05■□□□□ 0.8
VARS-216ENST00000428445 BAZ2AQ9UIF9 1905 aaKnown RBP20.05■□□□□ 0.8
VARS-216ENST00000428445 TMED8Q6PL24 325 aaPredicted RBP20.04■□□□□ 0.8
VARS-216ENST00000428445 SPICE1Q8N0Z3 855 aa20.04■□□□□ 0.8
VARS-216ENST00000428445 CLASRPQ8N2M8 674 aaKnown RBP20.04■□□□□ 0.8
VARS-216ENST00000428445 DEFB123Q8N688 67 aa20.04■□□□□ 0.8
VARS-216ENST00000428445 TANGO6Q9C0B7 1094 aa20.04■□□□□ 0.8
VARS-216ENST00000428445 DDX20Q9UHI6 824 aaKnown RBP20.04■□□□□ 0.8
VARS-216ENST00000428445 COG6Q9Y2V7 657 aa20.04■□□□□ 0.8
VARS-216ENST00000428445 IVNS1ABPQ9Y6Y0 642 aa20.04■□□□□ 0.8
VARS-216ENST00000428445 IFIT2P09913 472 aaKnown RBP20.03■□□□□ 0.8
VARS-216ENST00000428445 AKR1B1P15121 316 aa20.03■□□□□ 0.8
VARS-216ENST00000428445 COG2Q14746 738 aa20.03■□□□□ 0.8
VARS-216ENST00000428445 HSP90AB4PQ58FF6 505 aa20.03■□□□□ 0.8
VARS-216ENST00000428445 PRAMEF19Q5SWL8 479 aa20.03■□□□□ 0.8
VARS-216ENST00000428445 COBLO75128 1261 aa20.02■□□□□ 0.8
VARS-216ENST00000428445 HOXC6P09630 235 aa20.02■□□□□ 0.8
VARS-216ENST00000428445 ADORA2AP29274 412 aa20.02■□□□□ 0.8
VARS-216ENST00000428445 LRIT3Q3SXY7 679 aa20.02■□□□□ 0.8
VARS-216ENST00000428445 GJC2Q5T442 439 aaPredicted RBP20.02■□□□□ 0.8
VARS-216ENST00000428445 DPP9Q86TI2 863 aa20.02■□□□□ 0.8
VARS-216ENST00000428445 KIF1BPQ96EK5 621 aa20.02■□□□□ 0.8
VARS-216ENST00000428445 MYH8P13535 1937 aa20.02■□□□□ 0.79
VARS-216ENST00000428445 DLL1O00548 723 aa20.01■□□□□ 0.79
VARS-216ENST00000428445 MBD4O95243 580 aa20.01■□□□□ 0.79
VARS-216ENST00000428445 IGHA2P01877 340 aa20.01■□□□□ 0.79
VARS-216ENST00000428445 ERCC3P19447 782 aa20.01■□□□□ 0.79
VARS-216ENST00000428445 PLS1Q14651 629 aa20.01■□□□□ 0.79
VARS-216ENST00000428445 SPATC1LQ9H0A9 340 aa20.01■□□□□ 0.79
VARS-216ENST00000428445 HOXC10Q9NYD6 342 aa20.01■□□□□ 0.79
VARS-216ENST00000428445 LAMA2P24043 3122 aaKnown RBP20■□□□□ 0.79
VARS-216ENST00000428445 ZNFX1Q9P2E3 1918 aaKnown RBP20■□□□□ 0.79
VARS-216ENST00000428445 A0A0C4DFX4 3053 aa20■□□□□ 0.79
VARS-216ENST00000428445 MYCNP04198 464 aaPredicted RBP20■□□□□ 0.79
VARS-216ENST00000428445 CYBAP13498 195 aa20■□□□□ 0.79
VARS-216ENST00000428445 ADD2P35612 726 aa20■□□□□ 0.79
VARS-216ENST00000428445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20■□□□□ 0.79
VARS-216ENST00000428445 LPAR1Q92633 364 aa20■□□□□ 0.79
VARS-216ENST00000428445 ATG4CQ96DT6 458 aa20■□□□□ 0.79
VARS-216ENST00000428445 ZBTB40Q9NUA8 1239 aa20■□□□□ 0.79
VARS-216ENST00000428445 PAG1Q9NWQ8 432 aa20■□□□□ 0.79
VARS-216ENST00000428445 DSG3P32926 999 aa19.99■□□□□ 0.79
VARS-216ENST00000428445 TMEM179Q6ZVK1 233 aa19.99■□□□□ 0.79
VARS-216ENST00000428445 NCAPG2Q86XI2 1143 aa19.99■□□□□ 0.79
VARS-216ENST00000428445 RPAP2Q8IXW5 612 aaPredicted RBP19.99■□□□□ 0.79
VARS-216ENST00000428445 MTMR10Q9NXD2 777 aa19.99■□□□□ 0.79
VARS-216ENST00000428445 SMCHD1A6NHR9 2005 aa19.98■□□□□ 0.79
VARS-216ENST00000428445 USP17L12C9JPN9 530 aa19.98■□□□□ 0.79
VARS-216ENST00000428445 USP17L21D6R901 530 aa19.98■□□□□ 0.79
VARS-216ENST00000428445 SMARCA5O60264 1052 aaPredicted RBP19.98■□□□□ 0.79
VARS-216ENST00000428445 FLOT1O75955 427 aa19.98■□□□□ 0.79
VARS-216ENST00000428445 CDK8P49336 464 aa19.98■□□□□ 0.79
VARS-216ENST00000428445 COL11A1P12107 1806 aaPredicted RBP19.97■□□□□ 0.79
VARS-216ENST00000428445 MS4A1P11836 297 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 RTP1P59025 263 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 ICA1Q05084 483 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 STK11IPQ8N1F8 1099 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 FBXO28Q9NVF7 368 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 SWAP70Q9UH65 585 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 ATP11BQ9Y2G3 1177 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 TMX2Q9Y320 296 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 ZBED9Q6R2W3 1325 aa19.97■□□□□ 0.79
VARS-216ENST00000428445 A0A0G2JMZ2 1700 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 DNM1LO00429 736 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 ATP5JP18859 108 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 TMEM132BQ14DG7 1078 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 C12orf60Q5U649 245 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
VARS-216ENST00000428445 GPR153Q6NV75 609 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 VCPKMTQ9H867 229 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 ARHGEF10LQ9HCE6 1279 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 PARP14Q460N5 1801 aa19.96■□□□□ 0.79
VARS-216ENST00000428445 STRNO43815 780 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 MSCO60682 206 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 RAB11FIP3O75154 756 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 HMMRO75330 724 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 EEF2P13639 858 aaKnown RBP19.95■□□□□ 0.78
VARS-216ENST00000428445 OLFML2BQ68BL8 750 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 SHCBP1Q8NEM2 672 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 FERMT2Q96AC1 680 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 FAM161BQ96MY7 647 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 HAUS7Q99871 368 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 PUS7LQ9H0K6 701 aaKnown RBP19.95■□□□□ 0.78
VARS-216ENST00000428445 ATP8A2Q9NTI2 1148 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 SLC4A4Q9Y6R1 1079 aa19.95■□□□□ 0.78
VARS-216ENST00000428445 RAD21O60216 631 aa19.94■□□□□ 0.78
VARS-216ENST00000428445 PGK2P07205 417 aa19.94■□□□□ 0.78
VARS-216ENST00000428445 CTR9Q6PD62 1173 aa19.94■□□□□ 0.78
VARS-216ENST00000428445 SLC39A5Q6ZMH5 540 aa19.94■□□□□ 0.78
VARS-216ENST00000428445 LBHD1Q9BQE6 289 aaPredicted RBP19.94■□□□□ 0.78
VARS-216ENST00000428445 DDX19BQ9UMR2 479 aa19.94■□□□□ 0.78
VARS-216ENST00000428445 MYH7P12883 1935 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms