RNA–Protein interactions for RNA: ENST00000428370.1

AC006001.3-205, humanhuman

BASIC

Gene AC006001.3, Length 579 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-205ENST00000428370 ZNF576Q9H609 170 aa13.97□□□□□ -0.17
AC006001.3-205ENST00000428370 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
AC006001.3-205ENST00000428370 EMILIN3Q9NT22 766 aa13.97□□□□□ -0.17
AC006001.3-205ENST00000428370 TLR7Q9NYK1 1049 aaKnown RBP13.97□□□□□ -0.17
AC006001.3-205ENST00000428370 THEGQ9P2T0 379 aa13.97□□□□□ -0.17
AC006001.3-205ENST00000428370 SERPINB13Q9UIV8 391 aa13.97□□□□□ -0.17
AC006001.3-205ENST00000428370 RABGAP1Q9Y3P9 1069 aa13.97□□□□□ -0.17
AC006001.3-205ENST00000428370 IVNS1ABPQ9Y6Y0 642 aa13.97□□□□□ -0.17
AC006001.3-205ENST00000428370 PLXNA1Q9UIW2 1896 aa13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 HOXC6P09630 235 aa13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 RLBP1P12271 317 aa13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 USP14P54578 494 aa13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 ZYXQ15942 572 aaKnown RBP13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 CEP85Q6P2H3 762 aa13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 MAGEB6Q8N7X4 407 aa13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 GAS2L1Q99501 681 aaPredicted RBP13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 SAP30BPQ9UHR5 308 aaKnown RBP13.96□□□□□ -0.17
AC006001.3-205ENST00000428370 MYH1P12882 1939 aa13.96□□□□□ -0.18
AC006001.3-205ENST00000428370 ZNF236Q9UL36 1845 aa13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 GH2P01242 217 aa13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 TLE2Q04725 743 aa13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 GRB14Q14449 540 aa13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 TTF1Q15361 905 aaPredicted RBP13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 LBX2Q6XYB7 198 aa13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 MIGA1Q8NAN2 632 aa13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 TIFAQ96CG3 184 aa13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 KIAA1683Q9H0B3 1180 aa13.95□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 CLTBP09497 229 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 RAG1P15918 1043 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 MRPS5P82675 430 aaKnown RBP13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 FPGSQ05932 587 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 LRRC41Q15345 812 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 CERKLQ49MI3 558 aaPredicted RBP13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 DNAH12Q6ZR08 3092 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 IL27Q8NEV9 243 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 BTBD7Q9P203 1132 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
AC006001.3-205ENST00000428370 TCF20Q9UGU0 1960 aaKnown RBP13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 MUC3AQ02505 3323 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 SEPT4O43236 478 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 IGHA2P01877 340 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 CCDC85BQ15834 202 aaPredicted RBP13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 ABCB5Q2M3G0 1257 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 FAM47AQ5JRC9 791 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 C1orf53Q5VUE5 145 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 CATSPERGQ6ZRH7 1159 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 DPP9Q86TI2 863 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 AACSQ86V21 672 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 FEZ1Q99689 392 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 RIOK1Q9BRS2 568 aaKnown RBP13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 PRDM12Q9H4Q4 367 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 CABP5Q9NP86 173 aa13.93□□□□□ -0.18
AC006001.3-205ENST00000428370 MS4A1P11836 297 aa13.92□□□□□ -0.18
AC006001.3-205ENST00000428370 GABPAQ06546 454 aa13.92□□□□□ -0.18
AC006001.3-205ENST00000428370 RAB3GAP1Q15042 981 aa13.92□□□□□ -0.18
AC006001.3-205ENST00000428370 PRAMEF19Q5SWL8 479 aa13.92□□□□□ -0.18
AC006001.3-205ENST00000428370 NECAB3Q96P71 396 aaPredicted RBP13.92□□□□□ -0.18
AC006001.3-205ENST00000428370 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
AC006001.3-205ENST00000428370 MAGEB6P1A0A0J9YX57 407 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 KIAA0355O15063 1070 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 PQBP1O60828 265 aaKnown RBP13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 VCAM1P19320 739 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 ADORA2AP29274 412 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 SHMT1P34896 483 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 PBX2P40425 430 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 PLCD1P51178 756 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 AKNAD1Q5T1N1 836 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 OLFML2BQ68BL8 750 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 CCDC129Q6ZRS4 1044 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 CLASRPQ8N2M8 674 aaKnown RBP13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 C1QTNF1Q9BXJ1 281 aa13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 CRNKL1Q9BZJ0 848 aaKnown RBP13.91□□□□□ -0.18
AC006001.3-205ENST00000428370 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 GRXCR1A8MXD5 290 aa13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 SLC9C2Q5TAH2 1124 aa13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 RPAP2Q8IXW5 612 aaPredicted RBP13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 KIF1BPQ96EK5 621 aa13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 PBX4Q9BYU1 374 aa13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 TMEM39AQ9NV64 488 aa13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 PHF24Q9UPV7 400 aa13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 GBF1Q92538 1859 aa13.9□□□□□ -0.18
AC006001.3-205ENST00000428370 NAV1Q8NEY1 1877 aa13.89□□□□□ -0.19
AC006001.3-205ENST00000428370 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
AC006001.3-205ENST00000428370 HMMRO75330 724 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms