RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 TMEM87BQ96K49 555 aa17.79■□□□□ 0.44
VARS2-203ENST00000428017 ZIC5Q96T25 663 aa17.79■□□□□ 0.44
VARS2-203ENST00000428017 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
VARS2-203ENST00000428017 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
VARS2-203ENST00000428017 VCPKMTQ9H867 229 aa17.79■□□□□ 0.44
VARS2-203ENST00000428017 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
VARS2-203ENST00000428017 MYH8P13535 1937 aa17.78■□□□□ 0.44
VARS2-203ENST00000428017 TESPA1A2RU30 521 aaPredicted RBP17.78■□□□□ 0.44
VARS2-203ENST00000428017 CASTP20810 708 aaKnown RBP17.78■□□□□ 0.44
VARS2-203ENST00000428017 WTAPQ15007 396 aa17.78■□□□□ 0.44
VARS2-203ENST00000428017 ENAHQ8N8S7 591 aaPredicted RBP17.78■□□□□ 0.44
VARS2-203ENST00000428017 BEGAINQ9BUH8 593 aa17.78■□□□□ 0.44
VARS2-203ENST00000428017 EMILIN3Q9NT22 766 aa17.78■□□□□ 0.44
VARS2-203ENST00000428017 ISY1Q9ULR0 285 aaKnown RBP17.78■□□□□ 0.44
VARS2-203ENST00000428017 CYP46A1Q9Y6A2 500 aa17.78■□□□□ 0.44
VARS2-203ENST00000428017 ATAD5Q96QE3 1844 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 F5H6K3 240 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 TM4SF4P48230 202 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 ANTXR2P58335 489 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 KLRC3Q07444 240 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 NFXL1Q6ZNB6 911 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 ANKRD23Q86SG2 305 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 IFNL1Q8IU54 200 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 SPICE1Q8N0Z3 855 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 DNAJC5GQ8N7S2 189 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 C12orf42Q96LP6 360 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 TMEM47Q9BQJ4 181 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 TM6SF1Q9BZW5 370 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 AGTPBP1Q9UPW5 1226 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 MTMR7Q9Y216 660 aa17.77■□□□□ 0.44
VARS2-203ENST00000428017 BTBD19C9JJ37 291 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 ALDH1A1P00352 501 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 VCAM1P19320 739 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 NOVP48745 357 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 MAP2K1Q02750 393 aaPredicted RBP17.76■□□□□ 0.43
VARS2-203ENST00000428017 DGKZQ13574 1117 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 SLFN13Q68D06 897 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 RCSD1Q6JBY9 416 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 TMTC2Q8N394 836 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 GMCL1P1Q8NEA9 526 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 ANKS1AQ92625 1134 aa17.76■□□□□ 0.43
VARS2-203ENST00000428017 CCDC69A6NI79 296 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 PDHXO00330 501 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 WDR46O15213 610 aaKnown RBP17.75■□□□□ 0.43
VARS2-203ENST00000428017 NDUFB10O96000 172 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 OSBPP22059 807 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 RPS6KB1P23443 525 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 IRX3P78415 501 aaPredicted RBP17.75■□□□□ 0.43
VARS2-203ENST00000428017 MOGSQ13724 837 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 SEC23AQ15436 765 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 TREML2Q5T2D2 321 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 RUFY3Q7L099 469 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 PNMA1Q8ND90 353 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 LRRC2Q9BYS8 371 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 TANGO6Q9C0B7 1094 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 RPAP3Q9H6T3 665 aaPredicted RBP17.75■□□□□ 0.43
VARS2-203ENST00000428017 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 ZCCHC17Q9NP64 241 aaKnown RBP17.75■□□□□ 0.43
VARS2-203ENST00000428017 PNMA3Q9UL41 463 aa17.75■□□□□ 0.43
VARS2-203ENST00000428017 USP17L15C9J2P7 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 USP17L13C9JLJ4 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 USP17L11C9JVI0 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 USP17L18D6R9N7 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 USP17L22D6RA61 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 USP17L17D6RBQ6 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 USP17L19D6RCP7 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 USP17L20D6RJB6 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 IGF2BP3O00425 579 aaKnown RBP eCLIP17.74■□□□□ 0.43
VARS2-203ENST00000428017 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
VARS2-203ENST00000428017 CPA1P15085 419 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 SLC1A4P43007 532 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 EXOSC10Q01780 885 aaKnown RBP17.74■□□□□ 0.43
VARS2-203ENST00000428017 USP17L24Q0WX57 530 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 CCDC96Q2M329 555 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 GPAT2Q6NUI2 795 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 CATIPQ7Z7H3 387 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 IGDCC4Q8TDY8 1250 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 CHMP4CQ96CF2 233 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 TCEANC2Q96MN5 208 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 PARK7Q99497 189 aaKnown RBP17.74■□□□□ 0.43
VARS2-203ENST00000428017 PTPN18Q99952 460 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 UPF3BQ9BZI7 483 aaKnown RBP17.74■□□□□ 0.43
VARS2-203ENST00000428017 SLC45A1Q9Y2W3 748 aa17.74■□□□□ 0.43
VARS2-203ENST00000428017 GREB1LQ9C091 1923 aaPredicted RBP17.73■□□□□ 0.43
VARS2-203ENST00000428017 BMP3P12645 472 aa17.73■□□□□ 0.43
VARS2-203ENST00000428017 LIFRP42702 1097 aa17.73■□□□□ 0.43
VARS2-203ENST00000428017 RBM25P49756 843 aaKnown RBP17.73■□□□□ 0.43
VARS2-203ENST00000428017 TAF1CQ15572 869 aaPredicted RBP17.73■□□□□ 0.43
VARS2-203ENST00000428017 FAM83BQ5T0W9 1011 aa17.73■□□□□ 0.43
VARS2-203ENST00000428017 SMCR8Q8TEV9 937 aaPredicted RBP17.73■□□□□ 0.43
VARS2-203ENST00000428017 DCAF4Q8WV16 495 aa17.73■□□□□ 0.43
VARS2-203ENST00000428017 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
VARS2-203ENST00000428017 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
VARS2-203ENST00000428017 HOXA7P31268 230 aaPredicted RBP17.72■□□□□ 0.43
VARS2-203ENST00000428017 IKQ13123 557 aaPredicted RBP17.72■□□□□ 0.43
VARS2-203ENST00000428017 KIAA1755Q5JYT7 1200 aa17.72■□□□□ 0.43
VARS2-203ENST00000428017 Q6ZUG5 572 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms