RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SLC9C1Q4G0N8 1177 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 C12orf60Q5U649 245 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CTR9Q6PD62 1173 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 USP17L2Q6R6M4 530 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CLEC10AQ8IUN9 316 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 NAV1Q8NEY1 1877 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ACER1Q8TDN7 264 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SEC62Q99442 399 aaKnown RBP11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ARPP21Q9UBL0 812 aaPredicted RBP11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SWAP70Q9UH65 585 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 MYPNQ86TC9 1320 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 GSG1L2A8MUP6 293 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 MYCP01106 439 aaPredicted RBP11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 GNRH1P01148 92 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 APPP05067 770 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 AKR1B1P15121 316 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 TDO2P48775 406 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CDK8P49336 464 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ICA1Q05084 483 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PRKCZQ05513 592 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 TMEM179Q6ZVK1 233 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CHD1LQ86WJ1 897 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 STK11IPQ8N1F8 1099 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ARMC5Q96C12 935 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 KIAA1683Q9H0B3 1180 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 EPB41L4AQ9HCS5 686 aaPredicted RBP11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 STAP2Q9UGK3 403 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SRRDQ9UH36 339 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 FOCADQ5VW36 1801 aa11.04□□□□□ -0.64
RFX3-AS1-202ENST00000427722 MINDY4BA8MYZ0 360 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 TNPO2O14787 897 aaKnown RBP11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 GNAT2P19087 354 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 VCAM1P19320 739 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 HOXD10P28358 340 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 GCLCP48506 637 aaPredicted RBP11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 USP14P54578 494 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PRMT2P55345 433 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 NUCB1Q02818 461 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 DSG2Q14126 1118 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ZMYM1Q5SVZ6 1142 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 C16orf86Q6ZW13 317 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 RAET1EQ8TD07 263 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SH3TC2Q8TF17 1288 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 EVI5LQ96CN4 794 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 C12orf42Q96LP6 360 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PCDHGA4Q9Y5G9 962 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 HTTP42858 3142 aa11.03□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CDK5RAP2Q96SN8 1893 aa11.02□□□□□ -0.64
RFX3-AS1-202ENST00000427722 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PEX10O60683 326 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 HERVK_113P62684 666 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 MLLT1Q03111 559 aaPredicted RBP11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CCDC129Q6ZRS4 1044 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ZNF333Q96JL9 665 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CCDC17Q96LX7 622 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 P2RX7Q99572 595 aaKnown RBP11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PAGR1Q9BTK6 254 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 KRTAP3-3Q9BYR6 98 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 KRTAP3-2Q9BYR7 98 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 NACAP1Q9BZK3 213 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 RPAP3Q9H6T3 665 aaPredicted RBP11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 LOC285556D6RIA3 1793 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ROBO3Q96MS0 1386 aa11.02□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PHIPQ8WWQ0 1821 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 A0A1W2PRG0 241 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 RGS19P49795 217 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ATP2B2Q01814 1243 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 SBK1Q52WX2 424 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 NBPF11Q86T75 865 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 NAPBQ9H115 298 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ARHGEF10LQ9HCE6 1279 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 TXNRD2Q9NNW7 524 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 GABRQQ9UN88 632 aa11.01□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ZSWIM8A7E2V4 1837 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 A0A0D9SFI3 127 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L15C9J2P7 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L13C9JLJ4 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L11C9JVI0 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L18D6R9N7 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L22D6RA61 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L17D6RBQ6 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L19D6RCP7 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L20D6RJB6 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 NUDT7P0C024 238 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 GRK4P32298 578 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 FLT3LGP49771 235 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 USP17L24Q0WX57 530 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 IFNL3Q8IZI9 196 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 SPICE1Q8N0Z3 855 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 GPRC5AQ8NFJ5 357 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 GTF3C2Q8WUA4 911 aaPredicted RBP11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 RILPL2Q969X0 211 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms