RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 USP17L15C9J2P7 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 USP17L13C9JLJ4 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 USP17L11C9JVI0 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 USP17L18D6R9N7 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 USP17L22D6RA61 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 USP17L17D6RBQ6 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 USP17L19D6RCP7 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 USP17L20D6RJB6 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 HOXD10P28358 340 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 HERVK_113P62684 666 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 PDE4BQ07343 736 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 USP17L24Q0WX57 530 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 PAGR1Q9BTK6 254 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 LSG1Q9H089 658 aaKnown RBP18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 RPAP3Q9H6T3 665 aaPredicted RBP18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 MYPNQ86TC9 1320 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 LAMA4Q16363 1823 aa18.59■□□□□ 0.57
CLK3P2-201ENST00000427566 ZNF213O14771 459 aa18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 TNPO2O14787 897 aaKnown RBP18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 PEX10O60683 326 aa18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 GNRH1P01148 92 aa18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 FGRP09769 529 aa18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 EEF2P13639 858 aaKnown RBP18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 FAM110CQ1W6H9 321 aa18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 SH2D4AQ9H788 454 aa18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 KANSL2Q9H9L4 492 aa18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 TAF6LQ9Y6J9 622 aa18.58■□□□□ 0.57
CLK3P2-201ENST00000427566 TFAP4Q01664 338 aa18.58■□□□□ 0.56
CLK3P2-201ENST00000427566 SLC9C1Q4G0N8 1177 aa18.58■□□□□ 0.56
CLK3P2-201ENST00000427566 SPICE1Q8N0Z3 855 aa18.58■□□□□ 0.56
CLK3P2-201ENST00000427566 RAET1EQ8TD07 263 aa18.58■□□□□ 0.56
CLK3P2-201ENST00000427566 MAP4K1Q92918 833 aa18.58■□□□□ 0.56
CLK3P2-201ENST00000427566 TANGO6Q9C0B7 1094 aa18.58■□□□□ 0.56
CLK3P2-201ENST00000427566 SRRDQ9UH36 339 aa18.58■□□□□ 0.56
CLK3P2-201ENST00000427566 PARP14Q460N5 1801 aa18.58■□□□□ 0.56
CLK3P2-201ENST00000427566 NEDD4P46934 1319 aa18.57■□□□□ 0.56
CLK3P2-201ENST00000427566 MYCP01106 439 aaPredicted RBP18.57■□□□□ 0.56
CLK3P2-201ENST00000427566 RRP12Q5JTH9 1297 aaKnown RBP18.57■□□□□ 0.56
CLK3P2-201ENST00000427566 AKNAD1Q5T1N1 836 aa18.57■□□□□ 0.56
CLK3P2-201ENST00000427566 CATSPERGQ6ZRH7 1159 aa18.57■□□□□ 0.56
CLK3P2-201ENST00000427566 STAG1Q8WVM7 1258 aa18.57■□□□□ 0.56
CLK3P2-201ENST00000427566 ANO2Q9NQ90 1003 aa18.57■□□□□ 0.56
CLK3P2-201ENST00000427566 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
CLK3P2-201ENST00000427566 COL11A1P12107 1806 aaPredicted RBP18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 IGKV6D-41A0A0C4DH26 115 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 ORC4O43929 436 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 NMT2O60551 498 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 CYP21A2P08686 494 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 TSPY3P0CV98 308 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 TSPY8P0CW00 308 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 PRMT2P55345 433 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 PRKCZQ05513 592 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 IMMTQ16891 758 aaKnown RBP18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 KIAA1755Q5JYT7 1200 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 CCAR1Q8IX12 1150 aaKnown RBP18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 COA7Q96BR5 231 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 CTNNA3Q9UI47 895 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 GABRQQ9UN88 632 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 TMX2Q9Y320 296 aa18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 RBM8AQ9Y5S9 174 aaKnown RBP18.56■□□□□ 0.56
CLK3P2-201ENST00000427566 RANBP6O60518 1105 aaKnown RBP18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 MFSD6Q6ZSS7 791 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 KIAA1211Q6ZU35 1233 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 NBPF11Q86T75 865 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 GPRC5AQ8NFJ5 357 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 NEDD1Q8NHV4 660 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 SH3TC2Q8TF17 1288 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 CEP95Q96GE4 821 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 VCPKMTQ9H867 229 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 CWC22Q9HCG8 908 aaKnown RBP18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 IL17RBQ9NRM6 502 aa18.55■□□□□ 0.56
CLK3P2-201ENST00000427566 RLFQ13129 1914 aa18.54■□□□□ 0.56
CLK3P2-201ENST00000427566 TSPY2A6NKD2 308 aa18.54■□□□□ 0.56
CLK3P2-201ENST00000427566 CASC1Q6TDU7 716 aa18.54■□□□□ 0.56
CLK3P2-201ENST00000427566 GTF3C2Q8WUA4 911 aaPredicted RBP18.54■□□□□ 0.56
CLK3P2-201ENST00000427566 GOPCQ9HD26 462 aa18.54■□□□□ 0.56
CLK3P2-201ENST00000427566 RBPJLQ9UBG7 517 aa18.54■□□□□ 0.56
CLK3P2-201ENST00000427566 MORF4L1Q9UBU8 362 aa18.54■□□□□ 0.56
CLK3P2-201ENST00000427566 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
CLK3P2-201ENST00000427566 PLXNB2O15031 1838 aa18.53■□□□□ 0.56
CLK3P2-201ENST00000427566 ERVK-9P63128 1117 aa18.53■□□□□ 0.56
CLK3P2-201ENST00000427566 ERVK-24P63145 666 aa18.53■□□□□ 0.56
CLK3P2-201ENST00000427566 LPAR1Q92633 364 aa18.53■□□□□ 0.56
CLK3P2-201ENST00000427566 MTMR4Q9NYA4 1195 aa18.53■□□□□ 0.56
CLK3P2-201ENST00000427566 BIN2Q9UBW5 565 aaPredicted RBP18.53■□□□□ 0.56
CLK3P2-201ENST00000427566 CLIP2Q9UDT6 1046 aa18.53■□□□□ 0.56
CLK3P2-201ENST00000427566 PLIN4Q96Q06 1357 aa18.53■□□□□ 0.56
CLK3P2-201ENST00000427566 FLOT1O75955 427 aa18.52■□□□□ 0.56
CLK3P2-201ENST00000427566 FLT3LGP49771 235 aa18.52■□□□□ 0.56
CLK3P2-201ENST00000427566 COG2Q14746 738 aa18.52■□□□□ 0.56
CLK3P2-201ENST00000427566 Q3C1V9 767 aa18.52■□□□□ 0.56
CLK3P2-201ENST00000427566 WDR78Q5VTH9 848 aa18.52■□□□□ 0.56
CLK3P2-201ENST00000427566 SPDYE16A6NNV3 312 aaPredicted RBP18.52■□□□□ 0.55
CLK3P2-201ENST00000427566 B4E1Z4 1266 aa18.52■□□□□ 0.55
CLK3P2-201ENST00000427566 WDR46O15213 610 aaKnown RBP18.52■□□□□ 0.55
CLK3P2-201ENST00000427566 NECTIN1Q15223 517 aa18.52■□□□□ 0.55
CLK3P2-201ENST00000427566 STOX1Q6ZVD7 989 aa18.52■□□□□ 0.55
CLK3P2-201ENST00000427566 RNF41Q9H4P4 317 aaPredicted RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms