RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TSPOAP1O95153 1857 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 PPEF1O14829 653 aaPredicted RBP14.62□□□□□ -0.07
SPG11-202ENST00000427534 ATP2A2P16615 1042 aaKnown RBP14.62□□□□□ -0.07
SPG11-202ENST00000427534 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
SPG11-202ENST00000427534 GCKRQ14397 625 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 HAUS3Q68CZ6 603 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 PPP4R4Q6NUP7 873 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 LLGL1Q15334 1064 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 CCDC110Q8TBZ0 833 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 FAM207AQ9NSI2 230 aaPredicted RBP14.62□□□□□ -0.07
SPG11-202ENST00000427534 SNX14Q9Y5W7 946 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 SYNRGQ9UMZ2 1314 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 KDRP35968 1356 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 ATP7AQ04656 1500 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 OATP04181 439 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 VPS41P49754 854 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 ANAPC4Q9UJX5 808 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 RPS8P62241 208 aaKnown RBP14.62□□□□□ -0.07
SPG11-202ENST00000427534 PRDM5Q9NQX1 630 aaPredicted RBP14.62□□□□□ -0.07
SPG11-202ENST00000427534 KCNH3Q9ULD8 1083 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 FAM196AQ6ZSG2 479 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 TBC1D31Q96DN5 1066 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 IRAK4Q9NWZ3 460 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 LRRIQ4A6NIV6 560 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 TMEM232C9JQI7 657 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 CAPN9O14815 690 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 ZBTB24O43167 697 aaPredicted RBP14.61□□□□□ -0.07
SPG11-202ENST00000427534 CALCOCO2Q13137 446 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 MAST3O60307 1309 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 PALM3A6NDB9 673 aaPredicted RBP14.61□□□□□ -0.07
SPG11-202ENST00000427534 TTC36A6NLP5 189 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 CNNM4Q6P4Q7 775 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 CPLX4Q7Z7G2 160 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 KDM2BQ8NHM5 1336 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 NONOQ15233 471 aaKnown RBP eCLIP14.61□□□□□ -0.07
SPG11-202ENST00000427534 LIN9Q5TKA1 542 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 ANO1Q5XXA6 986 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 APPBP2Q92624 585 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 PARP2Q9UGN5 583 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 POLIQ9UNA4 740 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 ANGEL1Q9UNK9 670 aaKnown RBP14.61□□□□□ -0.07
SPG11-202ENST00000427534 PPME1Q9Y570 386 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 TYW1BQ6NUM6 668 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 NELFBQ8WX92 580 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 CCPG1Q9ULG6 757 aa14.61□□□□□ -0.07
SPG11-202ENST00000427534 AKR1B15C9JRZ8 316 aaPredicted RBP14.6□□□□□ -0.07
SPG11-202ENST00000427534 SATB1Q01826 763 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 CDC37L1Q7L3B6 337 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 SEPT9Q9UHD8 586 aaPredicted RBP14.6□□□□□ -0.07
SPG11-202ENST00000427534 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.6□□□□□ -0.07
SPG11-202ENST00000427534 AOX1Q06278 1338 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 K7ENM7 598 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 DYNC1I1O14576 645 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 CHRNDQ07001 517 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 CCDC127Q96BQ5 260 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 EXOC7Q9UPT5 735 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 CEP57Q86XR8 500 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 BAG1Q99933 345 aaPredicted RBP14.6□□□□□ -0.07
SPG11-202ENST00000427534 NSRP1Q9H0G5 558 aaKnown RBP14.6□□□□□ -0.07
SPG11-202ENST00000427534 SRP68Q9UHB9 627 aaKnown RBP14.6□□□□□ -0.07
SPG11-202ENST00000427534 MTUS1Q9ULD2 1270 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 ELP1O95163 1332 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 HSPA4P34932 840 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 CRKLP46109 303 aaKnown RBP14.6□□□□□ -0.07
SPG11-202ENST00000427534 ERFEQ4G0M1 354 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 GPBP1Q86WP2 473 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 NSMCE1Q8WV22 266 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 ASIC3Q9UHC3 531 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 ATP10AO60312 1499 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 ADORA1P30542 326 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 LIG4P49917 911 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 GREM2Q9H772 168 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 ZKSCAN5Q9Y2L8 839 aa14.6□□□□□ -0.07
SPG11-202ENST00000427534 PLCD1P51178 756 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 PUS3Q9BZE2 481 aaKnown RBP14.59□□□□□ -0.07
SPG11-202ENST00000427534 SEC31BQ9NQW1 1179 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 DYNLL1P63167 89 aaKnown RBP14.59□□□□□ -0.07
SPG11-202ENST00000427534 SPATA24Q86W54 205 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 MICAL1Q8TDZ2 1067 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 AS3MTQ9HBK9 375 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 TBC1D8O95759 1140 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 KRT81Q14533 505 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 DAAM2Q86T65 1068 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 VPS52Q8N1B4 723 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 LSM14BQ9BX40 385 aaKnown RBP14.59□□□□□ -0.07
SPG11-202ENST00000427534 ARFGAP3Q9NP61 516 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 PARD3BQ8TEW8 1205 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 CHMP6Q96FZ7 201 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 PRKAG2Q9UGJ0 569 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 PALD1Q9ULE6 856 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.59□□□□□ -0.07
SPG11-202ENST00000427534 PTPRTO14522 1441 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 GADD45BO75293 160 aaPredicted RBP14.59□□□□□ -0.07
SPG11-202ENST00000427534 CLCN1P35523 988 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 ZBTB33Q86T24 672 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 MICALL1Q8N3F8 863 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 PSTPIP2Q9H939 334 aa14.59□□□□□ -0.07
SPG11-202ENST00000427534 PSDA5PKW4 1024 aaPredicted RBP14.58□□□□□ -0.07
SPG11-202ENST00000427534 CEP104O60308 925 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms