RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 TNIP1Q15025 636 aa9.81□□□□□ -0.84
SH3D19-204ENST00000427414 FAM83AQ86UY5 434 aa9.81□□□□□ -0.84
SH3D19-204ENST00000427414 MICU3Q86XE3 530 aa9.81□□□□□ -0.84
SH3D19-204ENST00000427414 JMYQ8N9B5 988 aa9.81□□□□□ -0.84
SH3D19-204ENST00000427414 MKL1Q969V6 931 aa9.81□□□□□ -0.84
SH3D19-204ENST00000427414 HERC5Q9UII4 1024 aaKnown RBP9.81□□□□□ -0.84
SH3D19-204ENST00000427414 DICER1Q9UPY3 1922 aaKnown RBP9.81□□□□□ -0.84
SH3D19-204ENST00000427414 PALM3A6NDB9 673 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-204ENST00000427414 CALML3P27482 149 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 TRAPPC10P48553 1259 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 ORC2Q13416 577 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-204ENST00000427414 RILPL1Q5EBL4 403 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 KRT40Q6A162 431 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 TATDN1Q6P1N9 297 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 NIM1KQ8IY84 436 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 DAGLBQ8NCG7 672 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 BBXQ8WY36 941 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-204ENST00000427414 DDX11Q96FC9 970 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 ZBED3Q96IU2 234 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-204ENST00000427414 IL17RBQ9NRM6 502 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 NAP1L2Q9ULW6 460 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-204ENST00000427414 FAM237AA0A1B0GTK4 181 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 C21orf2O43822 256 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 CCDC192P0DO97 292 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 SNHG28P0DPA3 235 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 PTGS1P23219 599 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 NCBP1Q09161 790 aaKnown RBP9.8□□□□□ -0.84
SH3D19-204ENST00000427414 AOC3Q16853 763 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 ASPRV1Q53RT3 343 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 MYSM1Q5VVJ2 828 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 MAPKAPK5Q8IW41 473 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 NKX2-3Q8TAU0 364 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 BRMS1Q9HCU9 246 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 CEP131Q9UPN4 1083 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 CNTNAP5Q8WYK1 1306 aa9.8□□□□□ -0.84
SH3D19-204ENST00000427414 CYP2D6P10635 497 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 PLCD1P51178 756 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 MAP3K10Q02779 954 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 PFKFB3Q16875 520 aaPredicted RBP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 ADALQ6DHV7 355 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 RBM43Q6ZSC3 357 aaKnown RBP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 PNMA1Q8ND90 353 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 CCDC12Q8WUD4 166 aaPredicted RBP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 PHF20Q9BVI0 1012 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 DBNDD1Q9H9R9 158 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 INCENPQ9NQS7 918 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 TMOD2Q9NZR1 351 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 NYAP2Q9P242 653 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 CYP2D7A0A087X1C5 515 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 TAF3Q5VWG9 929 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 DRC7Q8IY82 874 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 DPF2Q92785 391 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 C16orf45Q96MC5 204 aaPredicted RBP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 CGNQ9P2M7 1197 aaKnown RBP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 ESYT2A0FGR8 921 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 YDJCA8MPS7 323 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 ZNF280AP59817 542 aaPredicted RBP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 MCTP2Q6DN12 878 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 PPP1R18Q6NYC8 613 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 DHX37Q8IY37 1157 aaKnown RBP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 LARGE2Q8N3Y3 721 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
SH3D19-204ENST00000427414 CCDC148Q8NFR7 591 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 SLC26A6Q9BXS9 759 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 TAOK3Q9H2K8 898 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 MTMR4Q9NYA4 1195 aa9.79□□□□□ -0.84
SH3D19-204ENST00000427414 ADAMTSL1Q8N6G6 1762 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 DTNBO60941 627 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 TTLL1O95922 423 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 SLC39A14Q15043 492 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 PKN1Q16512 942 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 GPATCH4Q5T3I0 446 aaKnown RBP9.78□□□□□ -0.84
SH3D19-204ENST00000427414 CCDC186Q7Z3E2 898 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 NOSTRINQ8IVI9 506 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 OGFOD1Q8N543 542 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 FAM151AQ8WW52 585 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 TIGD1Q96MW7 591 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 GLT8D2Q9H1C3 349 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 GOLGA6L4A6NEF3 574 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 SPDYE2BA6NHP3 402 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 SPDYE6P0CI01 402 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 TNNT1P13805 278 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 TRAF1Q13077 416 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 SPDYE2Q495Y8 402 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 ANO1Q5XXA6 986 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 SLC51AQ86UW1 340 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 FAM200AQ8TCP9 573 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 TMEM47Q9BQJ4 181 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 JAG2Q9Y219 1238 aa9.78□□□□□ -0.84
SH3D19-204ENST00000427414 SMTNL1A8MU46 457 aa9.77□□□□□ -0.85
SH3D19-204ENST00000427414 SCG2P13521 617 aa9.77□□□□□ -0.85
SH3D19-204ENST00000427414 SHMT1P34896 483 aa9.77□□□□□ -0.85
SH3D19-204ENST00000427414 LRMPQ12912 555 aa9.77□□□□□ -0.85
SH3D19-204ENST00000427414 CFAP100Q494V2 611 aa9.77□□□□□ -0.85
SH3D19-204ENST00000427414 OLFM4Q6UX06 510 aa9.77□□□□□ -0.85
SH3D19-204ENST00000427414 TMEM179Q6ZVK1 233 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms