RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 GPHNQ9NQX3 736 aaPredicted RBP18.06■□□□□ 0.48
COL11A1-204ENST00000427239 KCNH4Q9UQ05 1017 aa18.06■□□□□ 0.48
COL11A1-204ENST00000427239 EVCP57679 992 aa18.05■□□□□ 0.48
COL11A1-204ENST00000427239 TOB2Q14106 344 aaPredicted RBP18.05■□□□□ 0.48
COL11A1-204ENST00000427239 SPRYD7Q5W111 196 aa18.05■□□□□ 0.48
COL11A1-204ENST00000427239 SYNE3Q6ZMZ3 975 aa18.05■□□□□ 0.48
COL11A1-204ENST00000427239 CATIPQ7Z7H3 387 aa18.05■□□□□ 0.48
COL11A1-204ENST00000427239 GMCL1P1Q8NEA9 526 aa18.05■□□□□ 0.48
COL11A1-204ENST00000427239 CNKSR2Q8WXI2 1034 aa18.05■□□□□ 0.48
COL11A1-204ENST00000427239 WNK4Q96J92 1243 aa18.05■□□□□ 0.48
COL11A1-204ENST00000427239 SLC12A7Q9Y666 1083 aa18.05■□□□□ 0.48
COL11A1-204ENST00000427239 F5H6K3 240 aa18.04■□□□□ 0.48
COL11A1-204ENST00000427239 KLRC3Q07444 240 aa18.04■□□□□ 0.48
COL11A1-204ENST00000427239 SH3D19Q5HYK7 790 aa18.04■□□□□ 0.48
COL11A1-204ENST00000427239 LPAR1Q92633 364 aa18.04■□□□□ 0.48
COL11A1-204ENST00000427239 VCPKMTQ9H867 229 aa18.04■□□□□ 0.48
COL11A1-204ENST00000427239 OTOFQ9HC10 1997 aa18.04■□□□□ 0.48
COL11A1-204ENST00000427239 RASSF10A6NK89 507 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 CALM1P0DP23 149 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 CALM2P0DP24 149 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 CALM3P0DP25 149 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 MCM2P49736 904 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 AK2P54819 239 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 SNAPC2Q13487 334 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 MTMR2Q13614 643 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 USP17L2Q6R6M4 530 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 SENP2Q9HC62 589 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 ATAD5Q96QE3 1844 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 GTF2A2P52657 109 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 RCAN1P53805 252 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 LRRC47Q8N1G4 583 aaKnown RBP18.03■□□□□ 0.48
COL11A1-204ENST00000427239 ZNF274Q96GC6 653 aaPredicted RBP18.03■□□□□ 0.48
COL11A1-204ENST00000427239 MAP3K14Q99558 947 aa18.03■□□□□ 0.48
COL11A1-204ENST00000427239 A0A0G2JLL6 359 aaPredicted RBP18.02■□□□□ 0.48
COL11A1-204ENST00000427239 SLC10A3P09131 477 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 GJA5P36382 358 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 C1QTNF8P60827 252 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 APOBRQ0VD83 1088 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 TROAPQ12815 778 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 APOA5Q6Q788 366 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 FASTKD5Q7L8L6 764 aaKnown RBP18.02■□□□□ 0.48
COL11A1-204ENST00000427239 PRRT2Q7Z6L0 340 aaPredicted RBP18.02■□□□□ 0.48
COL11A1-204ENST00000427239 RASAL3Q86YV0 1011 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 ZNF654Q8IZM8 581 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 C12orf42Q96LP6 360 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 TMOD4Q9NZQ9 345 aa18.02■□□□□ 0.48
COL11A1-204ENST00000427239 KLF18A0A0U1RQI7 1052 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 DDAH1O94760 285 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 HMGCS2P54868 508 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 PPP2R5BQ15173 497 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 ZYXQ15942 572 aaKnown RBP18.01■□□□□ 0.47
COL11A1-204ENST00000427239 SLFN13Q68D06 897 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 PROCA1Q8NCQ7 364 aaPredicted RBP18.01■□□□□ 0.47
COL11A1-204ENST00000427239 GMCL1Q96IK5 515 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 EMILIN3Q9NT22 766 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 LIMCH1Q9UPQ0 1083 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 ZBTB43O43298 467 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 RAD21O60216 631 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 CETPP11597 493 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 INHBEP58166 350 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 DCAF4Q8WV16 495 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 MS4A4AQ96JQ5 239 aa18.01■□□□□ 0.47
COL11A1-204ENST00000427239 NDUFB10O96000 172 aa18■□□□□ 0.47
COL11A1-204ENST00000427239 SNHG28P0DPA3 235 aa18■□□□□ 0.47
COL11A1-204ENST00000427239 PDIA3P30101 505 aaKnown RBP18■□□□□ 0.47
COL11A1-204ENST00000427239 SLC1A4P43007 532 aa18■□□□□ 0.47
COL11A1-204ENST00000427239 ZSCAN31Q96LW9 406 aaPredicted RBP18■□□□□ 0.47
COL11A1-204ENST00000427239 MANSC4A6NHS7 340 aaPredicted RBP17.99■□□□□ 0.47
COL11A1-204ENST00000427239 FAM155AB1AL88 458 aaPredicted RBP17.99■□□□□ 0.47
COL11A1-204ENST00000427239 PDHBP11177 359 aa17.99■□□□□ 0.47
COL11A1-204ENST00000427239 KIF5BP33176 963 aa17.99■□□□□ 0.47
COL11A1-204ENST00000427239 GPATCH4Q5T3I0 446 aaKnown RBP17.99■□□□□ 0.47
COL11A1-204ENST00000427239 PAXIP1Q6ZW49 1069 aaPredicted RBP17.99■□□□□ 0.47
COL11A1-204ENST00000427239 SPICE1Q8N0Z3 855 aa17.99■□□□□ 0.47
COL11A1-204ENST00000427239 FANCBQ8NB91 859 aa17.99■□□□□ 0.47
COL11A1-204ENST00000427239 NUP133Q8WUM0 1156 aa17.99■□□□□ 0.47
COL11A1-204ENST00000427239 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
COL11A1-204ENST00000427239 TPCN1Q9ULQ1 816 aa17.99■□□□□ 0.47
COL11A1-204ENST00000427239 NAP1L2Q9ULW6 460 aaPredicted RBP17.99■□□□□ 0.47
COL11A1-204ENST00000427239 WDR46O15213 610 aaKnown RBP17.98■□□□□ 0.47
COL11A1-204ENST00000427239 PARP1P09874 1014 aaKnown RBP17.98■□□□□ 0.47
COL11A1-204ENST00000427239 BMP3P12645 472 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 NOGQ13253 232 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 ASPRV1Q53RT3 343 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 CTCFLQ8NI51 663 aaPredicted RBP17.98■□□□□ 0.47
COL11A1-204ENST00000427239 PHIPQ8WWQ0 1821 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 HSPA6P17066 643 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 VCAM1P19320 739 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 MKRN3Q13064 507 aaKnown RBP17.98■□□□□ 0.47
COL11A1-204ENST00000427239 KIAA1755Q5JYT7 1200 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 CYP4F22Q6NT55 531 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 MICU3Q86XE3 530 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 SNX21Q969T3 373 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 CHMP4CQ96CF2 233 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 LARP6Q9BRS8 491 aaKnown RBP17.98■□□□□ 0.47
COL11A1-204ENST00000427239 MYL10Q9BUA6 226 aa17.98■□□□□ 0.47
COL11A1-204ENST00000427239 SH2B1Q9NRF2 756 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms