RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 TGM1P22735 817 aa4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 YBX1P67809 324 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 HID1Q8IV36 788 aa4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 Q8N1X5 172 aa4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 GPR62Q9BZJ7 368 aa4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 ANO2Q9NQ90 1003 aa4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 USP40Q9NVE5 1235 aa4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 ETF1P62495 437 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-205ENST00000425804 LLGL2Q6P1M3 1020 aa4.98□□□□□ -1.61
R3HDM1-205ENST00000425804 LINC01599Q8WXQ3 324 aa4.98□□□□□ -1.61
R3HDM1-205ENST00000425804 NECAB3Q96P71 396 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-205ENST00000425804 PPP4R2Q9NY27 417 aa4.98□□□□□ -1.61
R3HDM1-205ENST00000425804 BRPF3Q9ULD4 1205 aa4.98□□□□□ -1.61
R3HDM1-205ENST00000425804 PAGE1O75459 146 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 ITGB3P05106 788 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 ZNF20P17024 532 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 ACVRL1P37023 503 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 ETV3P41162 512 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 ZNF211Q13398 564 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 NT5DC1Q5TFE4 455 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 RASIP1Q5U651 963 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 OLFML2BQ68BL8 750 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 LDHDQ86WU2 507 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 PLPPR2Q96GM1 343 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 C1QTNF3Q9BXJ4 246 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 CRTAC1Q9NQ79 661 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 SAMM50Q9Y512 469 aa4.97□□□□□ -1.61
R3HDM1-205ENST00000425804 ABL1P00519 1130 aa4.96□□□□□ -1.62
R3HDM1-205ENST00000425804 SSFA2P28290 1259 aa4.96□□□□□ -1.62
R3HDM1-205ENST00000425804 TEKQ02763 1124 aa4.96□□□□□ -1.62
R3HDM1-205ENST00000425804 G6PC3Q9BUM1 346 aa4.96□□□□□ -1.62
R3HDM1-205ENST00000425804 ABLIM1O14639 778 aa4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 ENC1O14682 589 aa4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 CAP1Q01518 475 aa4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 SCARA3Q6AZY7 606 aa4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 HDXQ7Z353 690 aa4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 LSRQ86X29 649 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 C8orf49Q96NF6 230 aa4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 DPH2Q9BQC3 489 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 PCDHA5Q9Y5H7 936 aa4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 DUSP10Q9Y6W6 482 aa4.95□□□□□ -1.62
R3HDM1-205ENST00000425804 BUB1BO60566 1050 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 USP2O75604 605 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 CNR2P34972 360 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 NCKAP1LP55160 1127 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 PDE3BQ13370 1112 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 LRRC14Q15048 493 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 PI16Q6UXB8 463 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 TPTE2Q6XPS3 522 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 DTWD2Q8NBA8 298 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 RBM15Q96T37 977 aaKnown RBP eCLIP4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 FAM129BQ96TA1 746 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 BCO2Q9BYV7 579 aa4.94□□□□□ -1.62
R3HDM1-205ENST00000425804 NRDCO43847 1150 aa4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 GRK4P32298 578 aa4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 PTPN11Q06124 597 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 TMC6Q7Z403 805 aa4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 ADGRG2Q8IZP9 1017 aa4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 DNAJB8Q8NHS0 232 aa4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 SPATA25Q9BR10 227 aa4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 MTMR7Q9Y216 660 aa4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 ZNF281Q9Y2X9 895 aa4.93□□□□□ -1.62
R3HDM1-205ENST00000425804 A0A1B0GTL3 188 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 PNLIPP16233 465 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 ERVFRD-1P60508 538 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 CRIP3Q6Q6R5 217 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 LIPIQ6XZB0 460 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 DDX1Q92499 740 aaKnown RBP4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 PBXIP1Q96AQ6 731 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 NIF3L1Q9GZT8 377 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 KLHL14Q9P2G3 628 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 KCNH3Q9ULD8 1083 aa4.92□□□□□ -1.62
R3HDM1-205ENST00000425804 LIMS1P48059 325 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 CDK8P49336 464 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 SLC14A2Q15849 920 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 VWA3BQ502W6 1294 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 WIPI1Q5MNZ9 446 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 SPRED1Q7Z699 444 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 NLGN1Q8N2Q7 840 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 TTC9BQ8N6N2 239 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 LOXL4Q96JB6 756 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 NLRP2Q9NX02 1062 aa4.91□□□□□ -1.62
R3HDM1-205ENST00000425804 GPR182O15218 404 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 NDUFB5O43674 189 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 CEP128Q6ZU80 1094 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 C3orf58Q8NDZ4 430 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 SH3RF3Q8TEJ3 882 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 SAMD11Q96NU1 681 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 CEP44Q9C0F1 390 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 PCED1AQ9H1Q7 454 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 TJP2Q9UDY2 1190 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 CYP8B1Q9UNU6 501 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 SNCAIPQ9Y6H5 919 aa4.9□□□□□ -1.63
R3HDM1-205ENST00000425804 FZD7O75084 574 aa4.89□□□□□ -1.63
R3HDM1-205ENST00000425804 FBXO24O75426 580 aa4.89□□□□□ -1.63
R3HDM1-205ENST00000425804 MPOP05164 745 aa4.89□□□□□ -1.63
R3HDM1-205ENST00000425804 IGFBP6P24592 240 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-205ENST00000425804 NXPE4Q6UWF7 544 aa4.89□□□□□ -1.63
R3HDM1-205ENST00000425804 USP51Q70EK9 711 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms