RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ANKRD20A12PQ8NF67 263 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 ANKZF1Q9H8Y5 726 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 GUCA1BQ9UMX6 200 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 GLI3P10071 1580 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 SEC23AQ15436 765 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 RASGRP2Q7LDG7 609 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 SH3RF1Q7Z6J0 888 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 AK7Q96M32 723 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 PHF20Q9BVI0 1012 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 MTMR7Q9Y216 660 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 KIF1AQ12756 1690 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 ALS2Q96Q42 1657 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 CTAGE15A4D2H0 777 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 NMT2O60551 498 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 CTAGE8P0CG41 777 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 ERVK-24P63145 666 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 UBXN1Q04323 297 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 CHRNDQ07001 517 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 CTAGE6Q86UF2 777 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 TMTC1Q8IUR5 882 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 CTAGE4Q8IX94 777 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 EEF2KMTQ96G04 330 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 PLIN2Q99541 437 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 NAPGQ99747 312 aaPredicted RBP8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 UBXN6Q9BZV1 441 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 PNPLA7Q6ZV29 1317 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 COL18A1P39060 1754 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 TNS2Q63HR2 1409 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 PRPF3O43395 683 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 ERLIN1O75477 346 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 VEGFAP15692 232 aaPredicted RBP8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 PBX1P40424 430 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 COPB1P53618 953 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 ZSCAN26Q16670 478 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 FAM47AQ5JRC9 791 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 NELFBQ8WX92 580 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 CCDC102AQ96A19 550 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 CHP1Q99653 195 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 BTG4Q9NY30 223 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 TTF2Q9UNY4 1162 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 RTL9Q8NET4 1388 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 PLEKHG2Q9H7P9 1386 aa8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 BAZ2BQ9UIF8 2168 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-202ENST00000425518 USP17L12C9JPN9 530 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 USP17L21D6R901 530 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 N4BP1O75113 896 aaKnown RBP8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 EVX2Q03828 476 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 CCDC152Q4G0S7 254 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 BEND6Q5SZJ8 279 aaPredicted RBP8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 NCAPH2Q6IBW4 605 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 HDXQ7Z353 690 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 BBXQ8WY36 941 aaPredicted RBP8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 TRIM10Q9UDY6 481 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 GDAQ9Y2T3 454 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 KCNJ18B7U540 433 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 ENC1O14682 589 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 C4AP0C0L4 1744 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 C4BP0C0L5 1744 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 XDHP47989 1333 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 PAK1Q13153 545 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 KCNJ12Q14500 433 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 CTCFLQ8NI51 663 aaPredicted RBP8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 ABHD10Q9NUJ1 306 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 TFR2Q9UP52 801 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 ERVV-1B6SEH8 477 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 BMP15O95972 392 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 VSNL1P62760 191 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 CYP26C1Q6V0L0 522 aa8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 NIP7Q9Y221 180 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMARCC1-202ENST00000425518 COL5A2P05997 1499 aaPredicted RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 ADAMTS3O15072 1205 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 IL6STP40189 918 aaPredicted RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 FUT2Q10981 343 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 TROAPQ12815 778 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 TSR1Q2NL82 804 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 CT47A1Q5JQC4 288 aaPredicted RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 SRBD1Q8N5C6 995 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 NOA1Q8NC60 698 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 CCDC51Q96ER9 411 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 TMEM51Q9NW97 253 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 TRIM49BA6NDI0 452 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 POTEB2H3BUK9 544 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 RAD51AP2Q09MP3 1159 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 PPP2R5BQ15173 497 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 HSP90B2PQ58FF3 399 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 TCP11X2Q5H9J9 407 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 RASGRP4Q8TDF6 673 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 MTRQ99707 1265 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 GNL3LQ9NVN8 582 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 SLAIN2Q9P270 581 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 MYO6Q9UM54 1294 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 EPN1Q9Y6I3 576 aaPredicted RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 AKAP11Q9UKA4 1901 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 MAP2K7O14733 419 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 CAPN2P17655 700 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms