RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 GCKRQ14397 625 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 CWF19L2Q2TBE0 894 aaKnown RBP8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 PERM1Q5SV97 790 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 ZNF790Q6PG37 636 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 CWC27Q6UX04 472 aaKnown RBP8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 FAM184AQ8NB25 1140 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 SYAP1Q96A49 352 aaPredicted RBP8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 IFT43Q96FT9 208 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 GPATCH3Q96I76 525 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 BICC1Q9H694 974 aaKnown RBP8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 C19orf44Q9H6X5 657 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 CCDC171Q6TFL3 1326 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 KDM6AO15550 1401 aaPredicted RBP8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 ADAMTSL3P82987 1691 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 AK9Q5TCS8 1911 aa8.42□□□□□ -1.06
SEMA3A-203ENST00000424555 RGPD2P0DJD1 1756 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 MED23Q9ULK4 1368 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 NPHP3Q7Z494 1330 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 HYAL3O43820 417 aaPredicted RBP8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 F13A1P00488 732 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 IFIT2P09913 472 aaKnown RBP8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 PHKG2P15735 406 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 ATP5JP18859 108 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 IDH3AP50213 366 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 CASP7P55210 303 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 UBE2HP62256 183 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 G3BP1Q13283 466 aaKnown RBP eCLIP8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 ADCK5Q3MIX3 580 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 EPHA10Q5JZY3 1008 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 CREB3L3Q68CJ9 461 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 TRPM4Q8TD43 1214 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 FUCA2Q9BTY2 467 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 TSPY26PQ9H489 355 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 DIAPH3Q9NSV4 1193 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 PDRG1Q9NUG6 133 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 USP21Q9UK80 565 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 ZKSCAN5Q9Y2L8 839 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 CYP46A1Q9Y6A2 500 aa8.41□□□□□ -1.06
SEMA3A-203ENST00000424555 RFX7Q2KHR2 1363 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 SLC27A2O14975 620 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 TAF5LO75529 589 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 LARGE1O95461 756 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 TPM2P07951 284 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 MLLT1Q03111 559 aaPredicted RBP8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 NMIQ13287 307 aaPredicted RBP8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 ME3Q16798 604 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 CCDC183Q5T5S1 534 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 KRT25Q7Z3Z0 450 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 AACSQ86V21 672 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 WFDC12Q8WWY7 111 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 FOXD4L4Q8WXT5 416 aaPredicted RBP8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 KRTAP4-12Q9BQ66 201 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 QTRT2Q9H974 415 aaKnown RBP8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 SMC3Q9UQE7 1217 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 ATP6V1DQ9Y5K8 247 aa8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 RBM8AQ9Y5S9 174 aaKnown RBP8.4□□□□□ -1.06
SEMA3A-203ENST00000424555 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 SASH3O75995 380 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 SNRPA1P09661 255 aaKnown RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 CASTP20810 708 aaKnown RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 NOS3P29474 1203 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 PTPN12Q05209 780 aaKnown RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 OS9Q13438 667 aaPredicted RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 LRP8Q14114 963 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 PRPF40BQ6NWY9 871 aaKnown RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 COPS6Q7L5N1 327 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 DHX32Q7L7V1 743 aaKnown RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 IFNL2Q8IZJ0 200 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 ZNF496Q96IT1 587 aaPredicted RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 FAM227BQ96M60 508 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 JAKMIP1Q96N16 626 aaKnown RBP8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 FRRS1LQ9P0K9 344 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 HMG20BQ9P0W2 317 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 CCDC39Q9UFE4 941 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 TPCN1Q9ULQ1 816 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 CNPY2Q9Y2B0 182 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 COL18A1P39060 1754 aa8.39□□□□□ -1.07
SEMA3A-203ENST00000424555 ELP1O95163 1332 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 KIF1AQ12756 1690 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 ALS2Q96Q42 1657 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 OPLAHO14841 1288 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 CYP27B1O15528 508 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 CPA1P15085 419 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 ZKSCAN1P17029 563 aaPredicted RBP8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 RPS6KB1P23443 525 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 PSMA5P28066 241 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 GJB2P29033 226 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 IREB2P48200 963 aaKnown RBP8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 DGKZQ13574 1117 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 ANKRD1Q15327 319 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 NOL8Q76FK4 1167 aaKnown RBP8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 KRTAP1-3Q8IUG1 177 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 ANKMY2Q8IV38 441 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 DTWD1Q8N5C7 304 aa8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 NAP1L5Q96NT1 182 aaPredicted RBP8.38□□□□□ -1.07
SEMA3A-203ENST00000424555 CCDC8Q9H0W5 538 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms