RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 VWA5B2Q8N398 1253 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 MAGEB6Q8N7X4 407 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 MYOZ2Q9NPC6 264 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 HELLSQ9NRZ9 838 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 DIAPH3Q9NSV4 1193 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 JAG2Q9Y219 1238 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 PITPNM2Q9BZ72 1349 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 RPAP1Q9BWH6 1393 aaPredicted RBP8.43□□□□□ -1.06
EPHA4-206ENST00000424339 MYO5AQ9Y4I1 1855 aaKnown RBP8.43□□□□□ -1.06
EPHA4-206ENST00000424339 TCRBV5S4A2TA0A5A2 114 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 F8W031 263 aaPredicted RBP8.42□□□□□ -1.06
EPHA4-206ENST00000424339 CDC45O75419 566 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 EPHX2P34913 555 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 RBM5P52756 815 aaKnown RBP eCLIP8.42□□□□□ -1.06
EPHA4-206ENST00000424339 KIF4BQ2VIQ3 1234 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 CFAP100Q494V2 611 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 ZMYM1Q5SVZ6 1142 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 SV2AQ7L0J3 742 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 APOBEC3FQ8IUX4 373 aaKnown RBP8.42□□□□□ -1.06
EPHA4-206ENST00000424339 AIDAQ96BJ3 306 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 EDC3Q96F86 508 aaKnown RBP8.42□□□□□ -1.06
EPHA4-206ENST00000424339 DDRGK1Q96HY6 314 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 ZBED3Q96IU2 234 aaPredicted RBP8.42□□□□□ -1.06
EPHA4-206ENST00000424339 DAGLAQ9Y4D2 1042 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 ZNF532Q9HCE3 1301 aa8.42□□□□□ -1.06
EPHA4-206ENST00000424339 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 CDC14CA4D256 554 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 WNT10BO00744 389 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 MSTNO14793 375 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 TNNI2P48788 182 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 DIXDC1Q155Q3 683 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 MCMDC2Q4G0Z9 681 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 APOBEC3HQ6NTF7 200 aaKnown RBP8.41□□□□□ -1.06
EPHA4-206ENST00000424339 GIMAP6Q6P9H5 292 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 MXD3Q9BW11 206 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 CRNKL1Q9BZJ0 848 aaKnown RBP8.41□□□□□ -1.06
EPHA4-206ENST00000424339 TAF1DQ9H5J8 278 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-206ENST00000424339 GPBP1L1Q9HC44 474 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-206ENST00000424339 PPP2R3BQ9Y5P8 575 aa8.41□□□□□ -1.06
EPHA4-206ENST00000424339 COL2A1P02458 1487 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-206ENST00000424339 EPB41L2O43491 1005 aaKnown RBP8.4□□□□□ -1.06
EPHA4-206ENST00000424339 YY1P25490 414 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 CHMLP26374 656 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 EPS15P42566 896 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 BTDP43251 543 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 GRIK5Q16478 980 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 FAM83AQ86UY5 434 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 LDHDQ86WU2 507 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 ZNF384Q8TF68 577 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 HOOK2Q96ED9 719 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 RIOK1Q9BRS2 568 aaKnown RBP8.4□□□□□ -1.06
EPHA4-206ENST00000424339 IDI2Q9BXS1 227 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 NACAP1Q9BZK3 213 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 SLC24A3Q9HC58 644 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 ATP8A2Q9NTI2 1148 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 PGAP2Q9UHJ9 254 aa8.4□□□□□ -1.06
EPHA4-206ENST00000424339 ZMYM6O95789 1325 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 CCDC171Q6TFL3 1326 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 UTRNP46939 3433 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 FOCADQ5VW36 1801 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 GPAA1O43292 621 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 ADAM23O75077 832 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 ENTPD3O75355 529 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 REC8O95072 547 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 MAP3K10Q02779 954 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 TBC1D10BQ4KMP7 808 aaPredicted RBP8.39□□□□□ -1.07
EPHA4-206ENST00000424339 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 CDC42EP5Q6NZY7 148 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 KIAA1211Q6ZU35 1233 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 VASH1Q7L8A9 365 aaPredicted RBP8.39□□□□□ -1.07
EPHA4-206ENST00000424339 AMOTL1Q8IY63 956 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 OSBP2Q969R2 916 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 DCPSQ96C86 337 aaKnown RBP8.39□□□□□ -1.07
EPHA4-206ENST00000424339 PRMT6Q96LA8 375 aaPredicted RBP8.39□□□□□ -1.07
EPHA4-206ENST00000424339 DHX36Q9H2U1 1008 aaKnown RBP8.39□□□□□ -1.07
EPHA4-206ENST00000424339 AATFQ9NY61 560 aaKnown RBP eCLIP8.39□□□□□ -1.07
EPHA4-206ENST00000424339 MAP10Q9P2G4 905 aa8.39□□□□□ -1.07
EPHA4-206ENST00000424339 ADAMTSL1Q8N6G6 1762 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 SGSM2O43147 1006 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 MBD4O95243 580 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 FSHRP23945 695 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 NT5C2P49902 561 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 RHBDL3P58872 404 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 NMIQ13287 307 aaPredicted RBP8.38□□□□□ -1.07
EPHA4-206ENST00000424339 CWC27Q6UX04 472 aaKnown RBP8.38□□□□□ -1.07
EPHA4-206ENST00000424339 ADGRA1Q86SQ6 560 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 TEX11Q8IYF3 940 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 MIGA1Q8NAN2 632 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 TRPM4Q8TD43 1214 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 STRBPQ96SI9 672 aaKnown RBP8.38□□□□□ -1.07
EPHA4-206ENST00000424339 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 PUS7LQ9H0K6 701 aaKnown RBP8.38□□□□□ -1.07
EPHA4-206ENST00000424339 RRAGCQ9HB90 399 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 USP40Q9NVE5 1235 aa8.38□□□□□ -1.07
EPHA4-206ENST00000424339 ZNF70Q9UC06 446 aaPredicted RBP8.38□□□□□ -1.07
EPHA4-206ENST00000424339 ATRNL1Q5VV63 1379 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 CDK5RAP2Q96SN8 1893 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 A0A0D9SFI3 127 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms