RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CATSPERGQ6ZRH7 1159 aa21.84■■□□□ 1.09
HDAC6-205ENST00000423941 PNMA3Q9UL41 463 aa21.84■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L15C9J2P7 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L13C9JLJ4 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L11C9JVI0 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L18D6R9N7 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L22D6RA61 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L17D6RBQ6 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L19D6RCP7 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L20D6RJB6 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 USP17L24Q0WX57 530 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 PPP4R3BQ5MIZ7 849 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 CLIP2Q9UDT6 1046 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 TAF6LQ9Y6J9 622 aa21.83■■□□□ 1.09
HDAC6-205ENST00000423941 NMT2O60551 498 aa21.82■■□□□ 1.08
HDAC6-205ENST00000423941 FKTNO75072 461 aa21.82■■□□□ 1.08
HDAC6-205ENST00000423941 OSBPP22059 807 aa21.82■■□□□ 1.08
HDAC6-205ENST00000423941 POTEEQ6S8J3 1075 aa21.82■■□□□ 1.08
HDAC6-205ENST00000423941 ESR2Q92731 530 aa21.82■■□□□ 1.08
HDAC6-205ENST00000423941 TTC14Q96N46 770 aa21.82■■□□□ 1.08
HDAC6-205ENST00000423941 P2RX7Q99572 595 aaKnown RBP21.82■■□□□ 1.08
HDAC6-205ENST00000423941 CNNM2Q9H8M5 875 aa21.82■■□□□ 1.08
HDAC6-205ENST00000423941 ZSWIM5Q9P217 1185 aa21.82■■□□□ 1.08
HDAC6-205ENST00000423941 F5H6K3 240 aa21.81■■□□□ 1.08
HDAC6-205ENST00000423941 GCLCP48506 637 aaPredicted RBP21.81■■□□□ 1.08
HDAC6-205ENST00000423941 SP3Q02447 781 aa21.81■■□□□ 1.08
HDAC6-205ENST00000423941 KLRC3Q07444 240 aa21.81■■□□□ 1.08
HDAC6-205ENST00000423941 RRP12Q5JTH9 1297 aaKnown RBP21.81■■□□□ 1.08
HDAC6-205ENST00000423941 RCSD1Q6JBY9 416 aa21.81■■□□□ 1.08
HDAC6-205ENST00000423941 LBX2Q6XYB7 198 aa21.81■■□□□ 1.08
HDAC6-205ENST00000423941 GMCL1P1Q8NEA9 526 aa21.81■■□□□ 1.08
HDAC6-205ENST00000423941 KRT23Q9C075 422 aa21.81■■□□□ 1.08
HDAC6-205ENST00000423941 ANO2Q9NQ90 1003 aa21.81■■□□□ 1.08
HDAC6-205ENST00000423941 B4E1Z4 1266 aa21.8■■□□□ 1.08
HDAC6-205ENST00000423941 WDR46O15213 610 aaKnown RBP21.8■■□□□ 1.08
HDAC6-205ENST00000423941 ANKS1AQ92625 1134 aa21.8■■□□□ 1.08
HDAC6-205ENST00000423941 RPAP3Q9H6T3 665 aaPredicted RBP21.8■■□□□ 1.08
HDAC6-205ENST00000423941 GOPCQ9HD26 462 aa21.8■■□□□ 1.08
HDAC6-205ENST00000423941 TOMM22Q9NS69 142 aa21.8■■□□□ 1.08
HDAC6-205ENST00000423941 E7EWF7 191 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 SLC27A2O14975 620 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
HDAC6-205ENST00000423941 KDM4AO75164 1064 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 HERVK_113P62684 666 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 CAP1Q01518 475 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 ATP2B2Q01814 1243 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 TSGA10IPQ3SY00 556 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 STOX1Q6ZVD7 989 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 MORF4L1Q9UBU8 362 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 CPA4Q9UI42 421 aa21.79■■□□□ 1.08
HDAC6-205ENST00000423941 MGAMO43451 1857 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 NDUFB10O96000 172 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 IRX3P78415 501 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-205ENST00000423941 COL13A1Q5TAT6 717 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-205ENST00000423941 CREB3L3Q68CJ9 461 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 DGKHQ86XP1 1220 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 SPICE1Q8N0Z3 855 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 KCNB2Q92953 911 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 RBPJLQ9UBG7 517 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 ADAMTS5Q9UNA0 930 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 MYPNQ86TC9 1320 aa21.78■■□□□ 1.08
HDAC6-205ENST00000423941 LACTBP83111 547 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-205ENST00000423941 COG2Q14746 738 aa21.77■■□□□ 1.08
HDAC6-205ENST00000423941 FAM110CQ1W6H9 321 aa21.77■■□□□ 1.08
HDAC6-205ENST00000423941 CCDC178Q5BJE1 867 aa21.77■■□□□ 1.08
HDAC6-205ENST00000423941 SMCR8Q8TEV9 937 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-205ENST00000423941 GTF3C2Q8WUA4 911 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-205ENST00000423941 HOXC10Q9NYD6 342 aa21.77■■□□□ 1.08
HDAC6-205ENST00000423941 A0A0G2JMZ2 1700 aa21.77■■□□□ 1.08
HDAC6-205ENST00000423941 CYB5R4Q7L1T6 521 aa21.76■■□□□ 1.07
HDAC6-205ENST00000423941 IQCA1Q86XH1 822 aa21.76■■□□□ 1.07
HDAC6-205ENST00000423941 ERO1AQ96HE7 468 aa21.76■■□□□ 1.07
HDAC6-205ENST00000423941 GMCL1Q96IK5 515 aa21.76■■□□□ 1.07
HDAC6-205ENST00000423941 TMEM47Q9BQJ4 181 aa21.76■■□□□ 1.07
HDAC6-205ENST00000423941 STX8Q9UNK0 236 aa21.76■■□□□ 1.07
HDAC6-205ENST00000423941 ZSWIM8A7E2V4 1837 aa21.76■■□□□ 1.07
HDAC6-205ENST00000423941 SPDYE16A6NNV3 312 aaPredicted RBP21.75■■□□□ 1.07
HDAC6-205ENST00000423941 REC8O95072 547 aa21.75■■□□□ 1.07
HDAC6-205ENST00000423941 TOP1P11387 765 aaKnown RBP21.75■■□□□ 1.07
HDAC6-205ENST00000423941 CTGFP29279 349 aa21.75■■□□□ 1.07
HDAC6-205ENST00000423941 DSG3P32926 999 aa21.75■■□□□ 1.07
HDAC6-205ENST00000423941 SEC23AQ15436 765 aa21.75■■□□□ 1.07
HDAC6-205ENST00000423941 MB21D2Q8IYB1 491 aaPredicted RBP21.75■■□□□ 1.07
HDAC6-205ENST00000423941 LRRC47Q8N1G4 583 aaKnown RBP21.75■■□□□ 1.07
HDAC6-205ENST00000423941 ANKRD13CQ8N6S4 541 aa21.75■■□□□ 1.07
HDAC6-205ENST00000423941 NCOA7Q8NI08 942 aa21.75■■□□□ 1.07
HDAC6-205ENST00000423941 ZSCAN10Q96SZ4 725 aaPredicted RBP21.75■■□□□ 1.07
HDAC6-205ENST00000423941 TXNRD2Q9NNW7 524 aa21.75■■□□□ 1.07
HDAC6-205ENST00000423941 RABGAP1Q9Y3P9 1069 aa21.75■■□□□ 1.07
HDAC6-205ENST00000423941 CNMDO75829 334 aa21.74■■□□□ 1.07
HDAC6-205ENST00000423941 TRDNQ13061 729 aa21.74■■□□□ 1.07
HDAC6-205ENST00000423941 FAM83BQ5T0W9 1011 aa21.74■■□□□ 1.07
HDAC6-205ENST00000423941 ENAHQ8N8S7 591 aaPredicted RBP21.74■■□□□ 1.07
HDAC6-205ENST00000423941 CD99L2Q8TCZ2 262 aa21.74■■□□□ 1.07
HDAC6-205ENST00000423941 ZKSCAN3Q9BRR0 538 aa21.74■■□□□ 1.07
HDAC6-205ENST00000423941 PLA2G6O60733 806 aa21.73■■□□□ 1.07
HDAC6-205ENST00000423941 HSPA4P34932 840 aa21.73■■□□□ 1.07
HDAC6-205ENST00000423941 SLFN13Q68D06 897 aa21.73■■□□□ 1.07
HDAC6-205ENST00000423941 CTU1Q7Z7A3 348 aaKnown RBP21.73■■□□□ 1.07
HDAC6-205ENST00000423941 RASEFQ8IZ41 740 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms