RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 BMP2KLQ5H9B9 411 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 WDR78Q5VTH9 848 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 FBXO46Q6PJ61 603 aaPredicted RBP11.46□□□□□ -0.57
HERC3-204ENST00000422770 P2RX7Q99572 595 aaKnown RBP11.46□□□□□ -0.57
HERC3-204ENST00000422770 INCENPQ9NQS7 918 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 MTMR7Q9Y216 660 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 RAD50Q92878 1312 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 PLXNB2O15031 1838 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 ZNF213O14771 459 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 PEX10O60683 326 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 FLOT1O75955 427 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 BCRP11274 1271 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 CHMLP26374 656 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 HOXD10P28358 340 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 HOXA7P31268 230 aaPredicted RBP11.45□□□□□ -0.58
HERC3-204ENST00000422770 ALX1Q15699 326 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 MFSD6Q6ZSS7 791 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 LRRC47Q8N1G4 583 aaKnown RBP11.45□□□□□ -0.58
HERC3-204ENST00000422770 TRIM47Q96LD4 638 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 C12orf42Q96LP6 360 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 HPS5Q9UPZ3 1129 aa11.45□□□□□ -0.58
HERC3-204ENST00000422770 ZMYM6O95789 1325 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 MYPNQ86TC9 1320 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 DOCK3Q8IZD9 2030 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 MYCP01106 439 aaPredicted RBP11.44□□□□□ -0.58
HERC3-204ENST00000422770 CAP1Q01518 475 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 PLS1Q14651 629 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 IMMTQ16891 758 aaKnown RBP11.44□□□□□ -0.58
HERC3-204ENST00000422770 FAM110CQ1W6H9 321 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 FAM83BQ5T0W9 1011 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 CATSPERGQ6ZRH7 1159 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 KIAA1211Q6ZU35 1233 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 RAET1EQ8TD07 263 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 LPAR1Q92633 364 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 COA7Q96BR5 231 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 CEP95Q96GE4 821 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 VCPKMTQ9H867 229 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 CTNNA3Q9UI47 895 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 STX8Q9UNK0 236 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 PTPN22Q9Y2R2 807 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 TMX2Q9Y320 296 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 PTCH2Q9Y6C5 1203 aa11.44□□□□□ -0.58
HERC3-204ENST00000422770 A0A0G2JMZ2 1700 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 RLFQ13129 1914 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 WDR46O15213 610 aaKnown RBP11.43□□□□□ -0.58
HERC3-204ENST00000422770 NMT2O60551 498 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 CDC45O75419 566 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 TTLL1O95922 423 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
HERC3-204ENST00000422770 SLC9C1Q4G0N8 1177 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 KIAA1755Q5JYT7 1200 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 CASC1Q6TDU7 716 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 SIAH1Q8IUQ4 282 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 TBC1D10CQ8IV04 446 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 GPRC5AQ8NFJ5 357 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 NEDD1Q8NHV4 660 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 GTF3C2Q8WUA4 911 aaPredicted RBP11.43□□□□□ -0.58
HERC3-204ENST00000422770 NUP88Q99567 741 aaPredicted RBP11.43□□□□□ -0.58
HERC3-204ENST00000422770 DSCC1Q9BVC3 393 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
HERC3-204ENST00000422770 IL25Q9H293 177 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 RNF41Q9H4P4 317 aaPredicted RBP11.43□□□□□ -0.58
HERC3-204ENST00000422770 NYAP2Q9P242 653 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 BIN2Q9UBW5 565 aaPredicted RBP11.43□□□□□ -0.58
HERC3-204ENST00000422770 ANAPC4Q9UJX5 808 aa11.43□□□□□ -0.58
HERC3-204ENST00000422770 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
HERC3-204ENST00000422770 CTDP1Q9Y5B0 961 aaPredicted RBP11.43□□□□□ -0.58
HERC3-204ENST00000422770 PLIN4Q96Q06 1357 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 NEDD4P46934 1319 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 SPDYE16A6NNV3 312 aaPredicted RBP11.42□□□□□ -0.58
HERC3-204ENST00000422770 GNRH1P01148 92 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 CTGFP29279 349 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 SOX10P56693 466 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 ERVK-9P63128 1117 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 ERVK-24P63145 666 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 PRKCZQ05513 592 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 TXNRD2Q9NNW7 524 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 MTMR4Q9NYA4 1195 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 SRRDQ9UH36 339 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
HERC3-204ENST00000422770 ORC4O43929 436 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 NDUFB10O96000 172 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 CCNA1P78396 465 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 PTH1RQ03431 593 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 COG2Q14746 738 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 CCDC96Q2M329 555 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 SH3TC2Q8TF17 1288 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 STAG1Q8WVM7 1258 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 ESR2Q92731 530 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 ATG4CQ96DT6 458 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 ZKSCAN3Q9BRR0 538 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 NBPF3Q9H094 633 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 HOXC10Q9NYD6 342 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 RBPJLQ9UBG7 517 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 GABRQQ9UN88 632 aa11.41□□□□□ -0.58
HERC3-204ENST00000422770 IGKV6D-41A0A0C4DH26 115 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms