RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PPP4R3BQ5MIZ7 849 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 PNMA1Q8ND90 353 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 AGXT2Q9BYV1 514 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 TMX2Q9Y320 296 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 USP17L10C9JJH3 530 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 LIFRP42702 1097 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 PAXIP1Q6ZW49 1069 aaPredicted RBP18.42■□□□□ 0.54
DDX55-203ENST00000421670 RAB11FIP4Q86YS3 637 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 ANKS1AQ92625 1134 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 MKL1Q969V6 931 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 MYL10Q9BUA6 226 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 TBC1D2Q9BYX2 928 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 SH2D4AQ9H788 454 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 CCDC69A6NI79 296 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 CD2BP2O95400 341 aaKnown RBP18.41■□□□□ 0.54
DDX55-203ENST00000421670 HMGCS2P54868 508 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 BACE1P56817 501 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 GRM1Q13255 1194 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 KIAA1755Q5JYT7 1200 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 SPRYD7Q5W111 196 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 SGMS1Q86VZ5 419 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 SPICE1Q8N0Z3 855 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 FBXL16Q8N461 479 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 KIAA1683Q9H0B3 1180 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 BRPF3Q9ULD4 1205 aa18.41■□□□□ 0.54
DDX55-203ENST00000421670 KLF18A0A0U1RQI7 1052 aa18.4■□□□□ 0.54
DDX55-203ENST00000421670 SLC10A3P09131 477 aa18.4■□□□□ 0.54
DDX55-203ENST00000421670 ZNF654Q8IZM8 581 aa18.4■□□□□ 0.54
DDX55-203ENST00000421670 HHIPL1Q96JK4 782 aa18.4■□□□□ 0.54
DDX55-203ENST00000421670 NAP1L2Q9ULW6 460 aaPredicted RBP18.4■□□□□ 0.54
DDX55-203ENST00000421670 KCNH4Q9UQ05 1017 aa18.4■□□□□ 0.54
DDX55-203ENST00000421670 ST18O60284 1047 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 NDUFB10O96000 172 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 ZBTB48P10074 688 aaPredicted RBP18.39■□□□□ 0.53
DDX55-203ENST00000421670 RXRAP19793 462 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 C1QTNF8P60827 252 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 APOA5Q6Q788 366 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 MICU3Q86XE3 530 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 ALDH8A1Q9H2A2 487 aaPredicted RBP18.39■□□□□ 0.53
DDX55-203ENST00000421670 VCPKMTQ9H867 229 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 GOPCQ9HD26 462 aa18.39■□□□□ 0.53
DDX55-203ENST00000421670 A0A0G2JLL6 359 aaPredicted RBP18.38■□□□□ 0.53
DDX55-203ENST00000421670 RASSF10A6NK89 507 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 FAM155AB1AL88 458 aaPredicted RBP18.38■□□□□ 0.53
DDX55-203ENST00000421670 F5H6K3 240 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 KLRC3Q07444 240 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 PRRT2Q7Z6L0 340 aaPredicted RBP18.38■□□□□ 0.53
DDX55-203ENST00000421670 CATIPQ7Z7H3 387 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 TMTC2Q8N394 836 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 GMCL1P1Q8NEA9 526 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 NUP88Q99567 741 aaPredicted RBP18.38■□□□□ 0.53
DDX55-203ENST00000421670 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 MYH6P13533 1939 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 RLFQ13129 1914 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 GOLGA8BA8MQT2 603 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 CXCL11O14625 94 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 USP14P54578 494 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 TROAPQ12815 778 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 SNAPC2Q13487 334 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 ANKRD1Q15327 319 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 NUP133Q8WUM0 1156 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 SYNPO2Q9UMS6 1093 aa18.38■□□□□ 0.53
DDX55-203ENST00000421670 COL11A1P12107 1806 aaPredicted RBP18.37■□□□□ 0.53
DDX55-203ENST00000421670 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
DDX55-203ENST00000421670 PDHBP11177 359 aa18.37■□□□□ 0.53
DDX55-203ENST00000421670 VCAM1P19320 739 aa18.37■□□□□ 0.53
DDX55-203ENST00000421670 DEFB115Q30KQ5 88 aa18.37■□□□□ 0.53
DDX55-203ENST00000421670 SLFN13Q68D06 897 aa18.37■□□□□ 0.53
DDX55-203ENST00000421670 USP17L2Q6R6M4 530 aa18.37■□□□□ 0.53
DDX55-203ENST00000421670 GADL1Q6ZQY3 521 aa18.37■□□□□ 0.53
DDX55-203ENST00000421670 TPCN1Q9ULQ1 816 aa18.37■□□□□ 0.53
DDX55-203ENST00000421670 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
DDX55-203ENST00000421670 BAZ2BQ9UIF8 2168 aaKnown RBP18.37■□□□□ 0.53
DDX55-203ENST00000421670 THSD7BQ9C0I4 1608 aa18.36■□□□□ 0.53
DDX55-203ENST00000421670 FRMPD2Q68DX3 1309 aaPredicted RBP18.36■□□□□ 0.53
DDX55-203ENST00000421670 ZBTB43O43298 467 aa18.36■□□□□ 0.53
DDX55-203ENST00000421670 LARGE1O95461 756 aa18.36■□□□□ 0.53
DDX55-203ENST00000421670 SH3D19Q5HYK7 790 aa18.36■□□□□ 0.53
DDX55-203ENST00000421670 CCDC102AQ96A19 550 aa18.36■□□□□ 0.53
DDX55-203ENST00000421670 MS4A4AQ96JQ5 239 aa18.36■□□□□ 0.53
DDX55-203ENST00000421670 TMOD4Q9NZQ9 345 aa18.36■□□□□ 0.53
DDX55-203ENST00000421670 DDAH1O94760 285 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 HSPA6P17066 643 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 GTF2A2P52657 109 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 EVCP57679 992 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 STK3Q13188 491 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 MOGSQ13724 837 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 CCDC96Q2M329 555 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 TREML2Q5T2D2 321 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 KCTD1Q719H9 257 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 LPAR1Q92633 364 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 CAPNS2Q96L46 248 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 C12orf42Q96LP6 360 aa18.35■□□□□ 0.53
DDX55-203ENST00000421670 HPS5Q9UPZ3 1129 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms