RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 ELF2Q15723 593 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 E2F4Q16254 413 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 ZNF827Q17R98 1081 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 KMT5BQ4FZB7 885 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 TTC38Q5R3I4 469 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 TBC1D9BQ66K14 1250 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 SPECC1LQ69YQ0 1117 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 TRMT44Q8IYL2 757 aaKnown RBP9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 SRBD1Q8N5C6 995 aaKnown RBP9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 SYMPKQ92797 1274 aaKnown RBP9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 GSDMAQ96QA5 445 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 NYXQ9GZU5 481 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 NARFQ9UHQ1 456 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 COL11A2P13942 1736 aaPredicted RBP9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 VWA3AA6NCI4 1184 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 GOLGA6L9A6NEM1 432 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 USP17L12C9JPN9 530 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 USP17L21D6R901 530 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 ZSCAN12O43309 604 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 CD44P16070 742 aaKnown RBP9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 FECHP22830 423 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 CBX1P83916 185 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 EVX2Q03828 476 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 PFKFB3Q16875 520 aaPredicted RBP9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 NOM1Q5C9Z4 860 aaKnown RBP9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 RCSD1Q6JBY9 416 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 FBXO38Q6PIJ6 1188 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 PDILTQ8N807 584 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 ANKS1AQ92625 1134 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 DHX58Q96C10 678 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 PAGE5Q96GU1 130 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 CCDC34Q96HJ3 373 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 EPSTI1Q96J88 318 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 CRNKL1Q9BZJ0 848 aaKnown RBP9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 ANKRD2Q9GZV1 360 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 BRMS1Q9HCU9 246 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 MKRN1Q9UHC7 482 aaKnown RBP9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 PRDM4Q9UKN5 801 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 PPP2R2CQ9Y2T4 447 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 MYH11P35749 1972 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 XDHP47989 1333 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 SNED1Q8TER0 1413 aa9.94□□□□□ -0.82
TRIM49D1-201ENST00000420869 RBBP6Q7Z6E9 1792 aaKnown RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 PPP1R3GB7ZBB8 358 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 SCG2P13521 617 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 RPS8P62241 208 aaKnown RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 GOLGA8FQ08AF8 430 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 GOLGA8DPQ0D2H9 430 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 SPATA1Q5VX52 437 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 PDXDC2PQ6P474 469 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 LRRN4CLQ8ND94 238 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 CTCFLQ8NI51 663 aaPredicted RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 BAG1Q99933 345 aaPredicted RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 SRRTQ9BXP5 876 aaKnown RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 SAMSN1Q9NSI8 373 aaKnown RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 DNAI1Q9UI46 699 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 SLX4Q8IY92 1834 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 A0A0G2JS52 829 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 M0R2N6 131 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 RPS6KA4O75676 772 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 HIBADHP31937 336 aaKnown RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 PANX2Q96RD6 677 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 PYM1Q9BRP8 204 aaKnown RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 GTPBP4Q9BZE4 634 aaKnown RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 SH3GLB2Q9NR46 395 aa9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 ADD3Q9UEY8 706 aaKnown RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 V9GYY5 206 aaPredicted RBP9.93□□□□□ -0.82
TRIM49D1-201ENST00000420869 ITIH6Q6UXX5 1313 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 hCG_1642624A0A1W2PR95 340 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 NMT2O60551 498 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 TADA3O75528 432 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 CYP2D6P10635 497 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 ATP2B1P20020 1258 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 PRDX5P30044 214 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 TM4SF1P30408 202 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 PTGDRQ13258 359 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 PTPN21Q16825 1174 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 ARL6IP4Q66PJ3 421 aaKnown RBP9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 FAM177A1Q8N128 213 aaPredicted RBP9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 C4orf32Q8N8J7 132 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 NLRP3Q96P20 1036 aa9.92□□□□□ -0.82
TRIM49D1-201ENST00000420869 WDR81Q562E7 1941 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 ADAMTS3O15072 1205 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 GTPBP6O43824 516 aaPredicted RBP9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 CDK11BP21127 795 aaKnown RBP9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 GABPB1Q06547 395 aaPredicted RBP9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 GRM4Q14833 912 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 ZNF174Q15697 407 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 IL17AQ16552 155 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 DGKHQ86XP1 1220 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 DAGLBQ8NCG7 672 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms