RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 LPAR1Q92633 364 aa24.37■■□□□ 1.49
HMGXB4-203ENST00000420166 ASCC2Q9H1I8 757 aaPredicted RBP24.37■■□□□ 1.49
HMGXB4-203ENST00000420166 GOPCQ9HD26 462 aa24.37■■□□□ 1.49
HMGXB4-203ENST00000420166 TCP11L1Q9NUJ3 509 aa24.37■■□□□ 1.49
HMGXB4-203ENST00000420166 SYNPO2Q9UMS6 1093 aa24.37■■□□□ 1.49
HMGXB4-203ENST00000420166 GPR25O00155 361 aa24.36■■□□□ 1.49
HMGXB4-203ENST00000420166 SLC27A2O14975 620 aa24.36■■□□□ 1.49
HMGXB4-203ENST00000420166 TLR2O60603 784 aa24.36■■□□□ 1.49
HMGXB4-203ENST00000420166 KDM4AO75164 1064 aa24.36■■□□□ 1.49
HMGXB4-203ENST00000420166 MKL1Q969V6 931 aa24.36■■□□□ 1.49
HMGXB4-203ENST00000420166 REC8O95072 547 aa24.35■■□□□ 1.49
HMGXB4-203ENST00000420166 OSBPP22059 807 aa24.35■■□□□ 1.49
HMGXB4-203ENST00000420166 NOVP48745 357 aa24.35■■□□□ 1.49
HMGXB4-203ENST00000420166 IRX3P78415 501 aaPredicted RBP24.35■■□□□ 1.49
HMGXB4-203ENST00000420166 CREB3L3Q68CJ9 461 aa24.35■■□□□ 1.49
HMGXB4-203ENST00000420166 SPICE1Q8N0Z3 855 aa24.35■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L15C9J2P7 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L13C9JLJ4 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L11C9JVI0 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L18D6R9N7 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L22D6RA61 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L17D6RBQ6 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L19D6RCP7 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L20D6RJB6 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 E7EWF7 191 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 USP17L24Q0WX57 530 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 TRDNQ13061 729 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 STOX1Q6ZVD7 989 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 LRRC47Q8N1G4 583 aaKnown RBP24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 RPAP3Q9H6T3 665 aaPredicted RBP24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 PRDM10Q9NQV6 1147 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 STX8Q9UNK0 236 aa24.34■■□□□ 1.49
HMGXB4-203ENST00000420166 CATSPERGQ6ZRH7 1159 aa24.33■■□□□ 1.49
HMGXB4-203ENST00000420166 SMCR8Q8TEV9 937 aaPredicted RBP24.33■■□□□ 1.49
HMGXB4-203ENST00000420166 ZSWIM5Q9P217 1185 aa24.33■■□□□ 1.49
HMGXB4-203ENST00000420166 RLFQ13129 1914 aa24.33■■□□□ 1.49
HMGXB4-203ENST00000420166 PARP14Q460N5 1801 aa24.33■■□□□ 1.48
HMGXB4-203ENST00000420166 F5H6K3 240 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 WDR46O15213 610 aaKnown RBP24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 RAD21O60216 631 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 NDUFB10O96000 172 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 KLRC3Q07444 240 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 C17orf99Q6UX52 265 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 RALYLQ86SE5 291 aaKnown RBP24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 IQCA1Q86XH1 822 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 GMCL1P1Q8NEA9 526 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 ZNF296Q8WUU4 475 aaPredicted RBP24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 CPA4Q9UI42 421 aa24.32■■□□□ 1.48
HMGXB4-203ENST00000420166 FKTNO75072 461 aa24.31■■□□□ 1.48
HMGXB4-203ENST00000420166 CCDC178Q5BJE1 867 aa24.31■■□□□ 1.48
HMGXB4-203ENST00000420166 RCSD1Q6JBY9 416 aa24.31■■□□□ 1.48
HMGXB4-203ENST00000420166 NCOA7Q8NI08 942 aa24.31■■□□□ 1.48
HMGXB4-203ENST00000420166 ZKSCAN3Q9BRR0 538 aa24.31■■□□□ 1.48
HMGXB4-203ENST00000420166 TANGO6Q9C0B7 1094 aa24.31■■□□□ 1.48
HMGXB4-203ENST00000420166 HERVK_113P62684 666 aa24.3■■□□□ 1.48
HMGXB4-203ENST00000420166 CYB5R4Q7L1T6 521 aa24.3■■□□□ 1.48
HMGXB4-203ENST00000420166 TTC14Q96N46 770 aa24.3■■□□□ 1.48
HMGXB4-203ENST00000420166 ZSCAN10Q96SZ4 725 aaPredicted RBP24.3■■□□□ 1.48
HMGXB4-203ENST00000420166 P2RX7Q99572 595 aaKnown RBP24.3■■□□□ 1.48
HMGXB4-203ENST00000420166 EPB41L2O43491 1005 aaKnown RBP24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 BCRP11274 1271 aa24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 TOP1P11387 765 aaKnown RBP24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 GCLCP48506 637 aaPredicted RBP24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 SP3Q02447 781 aa24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 FAM83BQ5T0W9 1011 aa24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 DGKHQ86XP1 1220 aa24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 TMEM47Q9BQJ4 181 aa24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 UBAC1Q9BSL1 405 aa24.29■■□□□ 1.48
HMGXB4-203ENST00000420166 SLFN13Q68D06 897 aa24.28■■□□□ 1.48
HMGXB4-203ENST00000420166 MB21D2Q8IYB1 491 aaPredicted RBP24.28■■□□□ 1.48
HMGXB4-203ENST00000420166 GTF3C2Q8WUA4 911 aaPredicted RBP24.28■■□□□ 1.48
HMGXB4-203ENST00000420166 NUP88Q99567 741 aaPredicted RBP24.28■■□□□ 1.48
HMGXB4-203ENST00000420166 TNKSO95271 1327 aa24.28■■□□□ 1.48
HMGXB4-203ENST00000420166 HSPA4P34932 840 aa24.27■■□□□ 1.48
HMGXB4-203ENST00000420166 TSGA10IPQ3SY00 556 aa24.27■■□□□ 1.48
HMGXB4-203ENST00000420166 RASEFQ8IZ41 740 aa24.27■■□□□ 1.48
HMGXB4-203ENST00000420166 ANKRD13CQ8N6S4 541 aa24.27■■□□□ 1.48
HMGXB4-203ENST00000420166 ENAHQ8N8S7 591 aaPredicted RBP24.27■■□□□ 1.48
HMGXB4-203ENST00000420166 ANKS1AQ92625 1134 aa24.27■■□□□ 1.48
HMGXB4-203ENST00000420166 GMCL1Q96IK5 515 aa24.27■■□□□ 1.48
HMGXB4-203ENST00000420166 SPDYE16A6NNV3 312 aaPredicted RBP24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 FLOT1O75955 427 aa24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 ZKSCAN1P17029 563 aaPredicted RBP24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 COG2Q14746 738 aa24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 FAM110CQ1W6H9 321 aa24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 KCNB2Q92953 911 aa24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 A0A0G2JMZ2 1700 aa24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 ZSWIM8A7E2V4 1837 aa24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 MGAMO43451 1857 aa24.26■■□□□ 1.47
HMGXB4-203ENST00000420166 ANTXR2P58335 489 aa24.25■■□□□ 1.47
HMGXB4-203ENST00000420166 SEC23AQ15436 765 aa24.25■■□□□ 1.47
HMGXB4-203ENST00000420166 POTEEQ6S8J3 1075 aa24.25■■□□□ 1.47
HMGXB4-203ENST00000420166 LBX2Q6XYB7 198 aa24.25■■□□□ 1.47
HMGXB4-203ENST00000420166 ERO1AQ96HE7 468 aa24.25■■□□□ 1.47
HMGXB4-203ENST00000420166 USP26Q9BXU7 913 aa24.25■■□□□ 1.47
HMGXB4-203ENST00000420166 MYPNQ86TC9 1320 aa24.25■■□□□ 1.47
HMGXB4-203ENST00000420166 BMP3P12645 472 aa24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 MCCP23508 829 aa24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 SLC1A4P43007 532 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms