RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SIAH1Q8IUQ4 282 aa16.61■□□□□ 0.25
SHMT1P1-201ENST00000419974 GMCL1P1Q8NEA9 526 aa16.61■□□□□ 0.25
SHMT1P1-201ENST00000419974 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
SHMT1P1-201ENST00000419974 NCOA5Q9HCD5 579 aaKnown RBP16.61■□□□□ 0.25
SHMT1P1-201ENST00000419974 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
SHMT1P1-201ENST00000419974 PTPDC1A2A3K4 754 aa16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 FMNL1O95466 1100 aaPredicted RBP16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 BRD1O95696 1058 aa16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 RRP1BQ14684 758 aaKnown RBP16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 NBPF12Q5TAG4 269 aaPredicted RBP16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 SULF1Q8IWU6 871 aa16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 CDAN1Q8IWY9 1227 aa16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 RNF26Q9BY78 433 aaPredicted RBP16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 ZNF341Q9BYN7 854 aa16.6■□□□□ 0.25
SHMT1P1-201ENST00000419974 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 TRAF5O00463 557 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 FDPSP14324 419 aaKnown RBP16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 SYT1P21579 422 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 VEGFBP49765 207 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 IFFO2Q5TF58 517 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 WASF1Q92558 559 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
SHMT1P1-201ENST00000419974 WDR33Q9C0J8 1336 aaKnown RBP16.58■□□□□ 0.25
SHMT1P1-201ENST00000419974 FAM196BA6NMK8 535 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 STX6O43752 255 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 GH2P01242 217 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 HSPA1AP0DMV8 641 aaKnown RBP16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 HSPA1BP0DMV9 641 aaKnown RBP16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 PDHBP11177 359 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 ICA1Q05084 483 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 SEPT2Q15019 361 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 ASPRV1Q53RT3 343 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 GPATCH4Q5T3I0 446 aaKnown RBP16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 GMCL1Q96IK5 515 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 HHIPL1Q96JK4 782 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 MYL10Q9BUA6 226 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 SH2D4AQ9H788 454 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 CLIP2Q9UDT6 1046 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 MAD2L2Q9UI95 211 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 ABT1Q9ULW3 272 aaKnown RBP16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 TMX2Q9Y320 296 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 TLL2Q9Y6L7 1015 aa16.58■□□□□ 0.24
SHMT1P1-201ENST00000419974 MYH8P13535 1937 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 MPHOSPH10O00566 681 aaKnown RBP16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 PRPF3O43395 683 aaKnown RBP16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 JAK2O60674 1132 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 EEF2P13639 858 aaKnown RBP16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 JAG1P78504 1218 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 FMR1Q06787 632 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 MAP3K11Q16584 847 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 LARP1BQ659C4 914 aaKnown RBP16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 MIGA2Q7L4E1 593 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 TRIM22Q8IYM9 498 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 NUP133Q8WUM0 1156 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 DCAF4Q8WV16 495 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 SPZ1Q9BXG8 430 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 GLIS2Q9BZE0 524 aaPredicted RBP16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 ORC3Q9UBD5 711 aaPredicted RBP16.57■□□□□ 0.24
SHMT1P1-201ENST00000419974 SSC5DA1L4H1 1573 aa16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 DEXIO95424 95 aa16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 PARP1P09874 1014 aaKnown RBP16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 SSRP1Q08945 709 aaKnown RBP16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 KRT26Q7Z3Y9 468 aa16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 SAPCD2Q86UD0 394 aa16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 FAM184AQ8NB25 1140 aa16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 WDR18Q9BV38 432 aa16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 ARHGEF10LQ9HCE6 1279 aa16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 ZDHHC9Q9Y397 364 aa16.56■□□□□ 0.24
SHMT1P1-201ENST00000419974 PLA2G6O60733 806 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 CELF2O95319 508 aaKnown RBP16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 GDF11O95390 407 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 RXRAP19793 462 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 ECE1P42892 770 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 ZNF543Q08ER8 600 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 SCYL3Q8IZE3 742 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 RIOX1Q9H6W3 641 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 MTMR6Q9Y217 621 aa16.55■□□□□ 0.24
SHMT1P1-201ENST00000419974 ZSCAN22P10073 491 aaPredicted RBP16.54■□□□□ 0.24
SHMT1P1-201ENST00000419974 FBXO18Q8NFZ0 1043 aa16.54■□□□□ 0.24
SHMT1P1-201ENST00000419974 WBP1LQ9NX94 342 aa16.54■□□□□ 0.24
SHMT1P1-201ENST00000419974 CNTNAP5Q8WYK1 1306 aa16.54■□□□□ 0.24
SHMT1P1-201ENST00000419974 A0A1W2PRG0 241 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 USP17L5A8MUK1 530 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 F5H6K3 240 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 PPP1R12BO60237 982 aaPredicted RBP16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 USP2O75604 605 aaPredicted RBP16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 KLRC3Q07444 240 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 BTNL9Q6UXG8 535 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms