RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 FLT1P17948 1338 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 MYO5AQ9Y4I1 1855 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 A0A1B0GUL7 405 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 A0A1W2PQ45 241 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 A0A1W2PQY0 241 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 PQBP1O60828 265 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 TIMP1P01033 207 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP14P54578 494 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 PRAMEF19Q5SWL8 479 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 MFSD5Q6N075 450 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 ABRAQ8N0Z2 381 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 CRACR2BQ8N4Y2 399 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.33
RAPGEF1-205ENST00000419442 GH2P01242 217 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 PLCG2P16885 1265 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 PPIGQ13427 754 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 RAB30Q15771 203 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 AAK1Q2M2I8 961 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 TMEM31Q5JXX7 168 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 TATDN1Q6P1N9 297 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 PI16Q6UXB8 463 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 TBC1D9Q6ZT07 1266 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 RNF180Q86T96 592 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 MAPKAPK5Q8IW41 473 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 MAML3Q96JK9 1138 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 FEZ1Q99689 392 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 PA2G4Q9UQ80 394 aaKnown RBP12.95□□□□□ -0.34
RAPGEF1-205ENST00000419442 ADAMTS4O75173 837 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 RARBP10826 455 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 IGFBP4P22692 258 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 ZYXQ15942 572 aaKnown RBP12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 CCDC174Q6PII3 467 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 CCDC129Q6ZRS4 1044 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 TGFBRAP1Q8WUH2 860 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 TSEN34Q9BSV6 310 aaKnown RBP12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 C11orf16Q9NQ32 467 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 SLC5A4Q9NY91 659 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
RAPGEF1-205ENST00000419442 DCDC2CA8MYV0 355 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 ERC2O15083 957 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 GPR37L1O60883 481 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 BAG3O95817 575 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 PGK1P00558 417 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 ERCC3P19447 782 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 ACER1Q8TDN7 264 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 NOL10Q9BSC4 688 aaKnown RBP12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 AATFQ9NY61 560 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 MSRAQ9UJ68 235 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
RAPGEF1-205ENST00000419442 HLA-DOAP06340 250 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 KCNQ1P51787 676 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 TFF2Q03403 129 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 COG2Q14746 738 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 ZNF365Q70YC5 407 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 ALYREFQ86V81 257 aaKnown RBP12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 HERVK_113Q902F9 699 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 SNX27Q96L92 541 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 NKX2-4Q9H2Z4 354 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 MROH8Q9H579 483 aa12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 COL11A1P12107 1806 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-205ENST00000419442 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 PRRC2BQ5JSZ5 2229 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 MOXD2PA6NHM9 499 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 UBTFL1P0CB47 393 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 CSF2RAP15509 400 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 POU3F3P20264 500 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 MCAMP43121 646 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 CDK7P50613 346 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 ACLYP53396 1101 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 CCSAPQ6IQ19 270 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 NAA16Q6N069 864 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 ADGRA1Q86SQ6 560 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 KLHDC9Q8NEP7 349 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 EHD4Q9H223 541 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 SLC28A3Q9HAS3 691 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 YBX2Q9Y2T7 364 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-205ENST00000419442 MROH7Q68CQ1 1323 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 IGSF3O75054 1194 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 ZNF865P0CJ78 1059 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 AKR1A1P14550 325 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 GUCY1A2P33402 732 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 TFCP2Q12800 502 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 TMEM199Q8N511 208 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 MB21D1Q8N884 522 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms