RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 IFNL3Q8IZI9 196 aa14□□□□□ -0.17
THUMPD3-204ENST00000419437 RILPL2Q969X0 211 aa14□□□□□ -0.17
THUMPD3-204ENST00000419437 CCDC17Q96LX7 622 aa14□□□□□ -0.17
THUMPD3-204ENST00000419437 KIAA1683Q9H0B3 1180 aa14□□□□□ -0.17
THUMPD3-204ENST00000419437 ARPP21Q9UBL0 812 aaPredicted RBP14□□□□□ -0.17
THUMPD3-204ENST00000419437 CUL9Q8IWT3 2517 aa14□□□□□ -0.17
THUMPD3-204ENST00000419437 NAV1Q8NEY1 1877 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 TRIM6-TRIM34B2RNG4 842 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 HERVK_113P62684 666 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 ATP2B2Q01814 1243 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 NECAB2Q7Z6G3 386 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 CLEC10AQ8IUN9 316 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 PLEKHM2Q8IWE5 1019 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 MKNK2Q9HBH9 465 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 EPB41L4AQ9HCS5 686 aaPredicted RBP13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 MORF4L1Q9UBU8 362 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 TAOK2Q9UL54 1235 aa13.99□□□□□ -0.17
THUMPD3-204ENST00000419437 RPTORQ8N122 1335 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 Q3C1V9 767 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 CATSPERGQ6ZRH7 1159 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 CCDC129Q6ZRS4 1044 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 SIAH1Q8IUQ4 282 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 PAWRQ96IZ0 340 aaKnown RBP13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 C12orf42Q96LP6 360 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 PAGR1Q9BTK6 254 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 NACAP1Q9BZK3 213 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 RBPJLQ9UBG7 517 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 GJD2Q9UKL4 321 aa13.98□□□□□ -0.17
THUMPD3-204ENST00000419437 VCAM1P19320 739 aa13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 BMP8BP34820 402 aa13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 ICA1Q05084 483 aa13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 GPRC5AQ8NFJ5 357 aa13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 ARHGEF10LQ9HCE6 1279 aa13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 TXNRD2Q9NNW7 524 aa13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 HMX1Q9NP08 348 aaPredicted RBP13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 DDX60LQ5H9U9 1706 aaKnown RBP13.97□□□□□ -0.17
THUMPD3-204ENST00000419437 PRDM1O75626 825 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 XRCC5P13010 732 aaKnown RBP13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 EEF2P13639 858 aaKnown RBP13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 RASA1P20936 1047 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 KIAA1755Q5JYT7 1200 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 GPR153Q6NV75 609 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 POTEEQ6S8J3 1075 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 CCAR1Q8IX12 1150 aaKnown RBP13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 ZNF444Q8N0Y2 327 aaPredicted RBP13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 SPICE1Q8N0Z3 855 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 FAM227BQ96M60 508 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 NBPF3Q9H094 633 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 NAPBQ9H115 298 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
THUMPD3-204ENST00000419437 RAD21O60216 631 aa13.95□□□□□ -0.18
THUMPD3-204ENST00000419437 MAP3K21Q5TCX8 1036 aa13.95□□□□□ -0.18
THUMPD3-204ENST00000419437 TRMT44Q8IYL2 757 aaKnown RBP13.95□□□□□ -0.18
THUMPD3-204ENST00000419437 SOCS4Q8WXH5 440 aa13.95□□□□□ -0.18
THUMPD3-204ENST00000419437 GDF15Q99988 308 aa13.95□□□□□ -0.18
THUMPD3-204ENST00000419437 OSBPL3Q9H4L5 887 aa13.95□□□□□ -0.18
THUMPD3-204ENST00000419437 HELLSQ9NRZ9 838 aa13.95□□□□□ -0.18
THUMPD3-204ENST00000419437 TMX2Q9Y320 296 aa13.95□□□□□ -0.18
THUMPD3-204ENST00000419437 EYSQ5T1H1 3165 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 ERVK-9P63128 1117 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 ERVK-24P63145 666 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 NMIQ13287 307 aaPredicted RBP13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 COG2Q14746 738 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 MCMDC2Q4G0Z9 681 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 VPS53Q5VIR6 699 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 DIS3LQ8TF46 1054 aaKnown RBP13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 GTF3C2Q8WUA4 911 aaPredicted RBP13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 SH2D4AQ9H788 454 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 VCPKMTQ9H867 229 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 ZNF287Q9HBT7 754 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 HOXC10Q9NYD6 342 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 OGDHLQ9ULD0 1010 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 RABGAP1Q9Y3P9 1069 aa13.94□□□□□ -0.18
THUMPD3-204ENST00000419437 A0A0D9SFI3 127 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 FOXP2O15409 715 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 CNMDO75829 334 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 SLC3A2P08195 630 aaKnown RBP13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 SDSP20132 328 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 MAPK4P31152 587 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 MNX1P50219 401 aaPredicted RBP13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 CTDSPL2Q05D32 466 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 PPARAQ07869 468 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 TRIB2Q92519 343 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 NUDT12Q9BQG2 462 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 PORCNQ9H237 461 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 CWC22Q9HCG8 908 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms