RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 ZSCAN26Q16670 478 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 KIF4BQ2VIQ3 1234 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 ZNF569Q5MCW4 686 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 FAM182BQ5T319 152 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 USP49Q70CQ1 688 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 CNGA4Q8IV77 575 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 CRACR2BQ8N4Y2 399 aaPredicted RBP14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 HNRNPLLQ8WVV9 542 aaKnown RBP14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 CABP5Q9NP86 173 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 DOCK2Q92608 1830 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 CTAGE9A4FU28 777 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 MAP2K7O14733 419 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 TDO2P48775 406 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 STX17P56962 302 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 APTXQ7Z2E3 356 aaKnown RBP14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 CWC15Q9P013 229 aaKnown RBP14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 ADD3Q9UEY8 706 aaKnown RBP14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 TRIM75PA6NK02 468 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 EIF3JO75822 258 aaKnown RBP14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 AFMP43652 599 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 LMAN1P49257 510 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 NUP133Q8WUM0 1156 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 C8orf37Q96NL8 207 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 NACAP1Q9BZK3 213 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 AATFQ9NY61 560 aaKnown RBP eCLIP14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 PSD3Q9NYI0 1048 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 ADAM21Q9UKJ8 722 aa14.52□□□□□ -0.08
LRRTM1-205ENST00000417012 TIAM2Q8IVF5 1701 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 H3BQF6 201 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 CAPN2P17655 700 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 BARGINQ6ZT62 677 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 RASGRP2Q7LDG7 609 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 HDXQ7Z353 690 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 CMTR1Q8N1G2 835 aaKnown RBP14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 TMTC2Q8N394 836 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 OXER1Q8TDS5 423 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 SDR42E1Q8WUS8 393 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 CCDC51Q96ER9 411 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 ANKZF1Q9H8Y5 726 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 TTF2Q9UNY4 1162 aaKnown RBP14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 EP400Q96L91 3159 aa14.52□□□□□ -0.09
LRRTM1-205ENST00000417012 SEMA3EO15041 775 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 XBP1P17861 261 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 PBX1P40424 430 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 AKAP17AQ02040 695 aaKnown RBP14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 SLC20A2Q08357 652 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 MCM6Q14566 821 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 STAG1Q8WVM7 1258 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 ZNF652Q9Y2D9 606 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 GYS2P54840 703 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 CUL4BQ13620 913 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 CDKAL1Q5VV42 579 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 TBC1D9BQ66K14 1250 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 MSANTD4Q8NCY6 345 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 RAB21Q9UL25 225 aa14.51□□□□□ -0.09
LRRTM1-205ENST00000417012 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 CASP14P31944 242 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 USP5P45974 858 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 RCAN1P53805 252 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 BEND6Q5SZJ8 279 aaPredicted RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 ZNF654Q8IZM8 581 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 FANCBQ8NB91 859 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 GOLGA5Q8TBA6 731 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 RREB1Q92766 1687 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 A0A0U1RQJ8 604 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 CYP7A1P22680 504 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 ANKRD18AQ8IVF6 992 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 ATRIPQ8WXE1 791 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 CELF1Q92879 486 aaKnown RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 SMARCC1Q92922 1105 aaPredicted RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 PAGE5Q96GU1 130 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 GSDMAQ96QA5 445 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 CDC5LQ99459 802 aaKnown RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 UBAC1Q9BSL1 405 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 SRP68Q9UHB9 627 aaKnown RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 LTBP4Q8N2S1 1624 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 ITIH6Q6UXX5 1313 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 GNAT2P19087 354 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 SLC35F6Q8N357 371 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 EPSTI1Q96J88 318 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 ZFP91Q96JP5 570 aaPredicted RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 NAPGQ99747 312 aaPredicted RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 MTA3Q9BTC8 594 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 RNF41Q9H4P4 317 aaPredicted RBP14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 PDE11AQ9HCR9 933 aa14.5□□□□□ -0.09
LRRTM1-205ENST00000417012 A0A087X0B3 334 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 MINDY4BA8MYZ0 360 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 GYPCP04921 128 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 KLRK1P26718 216 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 NGLY1Q96IV0 654 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 PNKPQ96T60 521 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 GBP3Q9H0R5 595 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 VPS18Q9P253 973 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 BMP15O95972 392 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 TMTC1Q8IUR5 882 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 SMYD4Q8IYR2 804 aaPredicted RBP14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 SYMPKQ92797 1274 aaKnown RBP14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 FERMT2Q96AC1 680 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 RNF26Q9BY78 433 aaPredicted RBP14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 COL5A3P25940 1745 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms