RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 USP2O75604 605 aaPredicted RBP9.79□□□□□ -0.84
RBM39-208ENST00000416108 PARP1P09874 1014 aaKnown RBP9.79□□□□□ -0.84
RBM39-208ENST00000416108 INPP5BP32019 993 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 AKAP17AQ02040 695 aaKnown RBP9.79□□□□□ -0.84
RBM39-208ENST00000416108 SCRN1Q12765 414 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 CUL4AQ13619 759 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 RRP1BQ14684 758 aaKnown RBP9.79□□□□□ -0.84
RBM39-208ENST00000416108 GRM4Q14833 912 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 CCDC96Q2M329 555 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 NOL9Q5SY16 702 aaKnown RBP9.79□□□□□ -0.84
RBM39-208ENST00000416108 RCSD1Q6JBY9 416 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 CLEC10AQ8IUN9 316 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 ANKRD13AQ8IZ07 590 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 FAM184AQ8NB25 1140 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 FANCBQ8NB91 859 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 KLRG1Q96E93 195 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 MAP3K14Q99558 947 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 LLPHQ9BRT6 129 aaKnown RBP9.79□□□□□ -0.84
RBM39-208ENST00000416108 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
RBM39-208ENST00000416108 SYNPO2Q9UMS6 1093 aa9.79□□□□□ -0.84
RBM39-208ENST00000416108 MYH15Q9Y2K3 1946 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 PARP14Q460N5 1801 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 TRAF5O00463 557 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 GUCY1A2P33402 732 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 NOVP48745 357 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 FKBP1BP68106 108 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 HMGN5P82970 282 aaKnown RBP9.78□□□□□ -0.84
RBM39-208ENST00000416108 ASPRV1Q53RT3 343 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 SLFN13Q68D06 897 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 TRIM22Q8IYM9 498 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 C2orf69Q8N8R5 385 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.78□□□□□ -0.84
RBM39-208ENST00000416108 DCAF4Q8WV16 495 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 ZKSCAN4Q969J2 545 aaPredicted RBP9.78□□□□□ -0.84
RBM39-208ENST00000416108 MKL1Q969V6 931 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 NCOA5Q9HCD5 579 aaKnown RBP9.78□□□□□ -0.84
RBM39-208ENST00000416108 CWC22Q9HCG8 908 aaKnown RBP9.78□□□□□ -0.84
RBM39-208ENST00000416108 LOC285556D6RIA3 1793 aa9.78□□□□□ -0.84
RBM39-208ENST00000416108 CELF2O95319 508 aaKnown RBP9.77□□□□□ -0.85
RBM39-208ENST00000416108 YY1P25490 414 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 SLC1A4P43007 532 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 USP14P54578 494 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 SSRP1Q08945 709 aaKnown RBP9.77□□□□□ -0.85
RBM39-208ENST00000416108 TROAPQ12815 778 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 VGLL4Q14135 290 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 ZYXQ15942 572 aaKnown RBP9.77□□□□□ -0.85
RBM39-208ENST00000416108 SHROOM1Q2M3G4 852 aaPredicted RBP9.77□□□□□ -0.85
RBM39-208ENST00000416108 GPATCH4Q5T3I0 446 aaKnown RBP9.77□□□□□ -0.85
RBM39-208ENST00000416108 DLK2Q6UY11 383 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 SMC1BQ8NDV3 1235 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 GMCL1P1Q8NEA9 526 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 LZTS2Q9BRK4 669 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 GBA2Q9HCG7 927 aaPredicted RBP9.77□□□□□ -0.85
RBM39-208ENST00000416108 RBM27Q9P2N5 1060 aaKnown RBP9.77□□□□□ -0.85
RBM39-208ENST00000416108 FZD1Q9UP38 647 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 TMX2Q9Y320 296 aa9.77□□□□□ -0.85
RBM39-208ENST00000416108 GOLGB1Q14789 3259 aaKnown RBP9.76□□□□□ -0.85
RBM39-208ENST00000416108 PTPDC1A2A3K4 754 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 UNCXA6NJT0 531 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 USP17L10C9JJH3 530 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 F5H6K3 240 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 PDHBP11177 359 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 PTPRAP18433 802 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 GJB2P29033 226 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 CDC27P30260 824 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
RBM39-208ENST00000416108 ECE1P42892 770 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 JAG1P78504 1218 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 KLRC3Q07444 240 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 IKQ13123 557 aaPredicted RBP9.76□□□□□ -0.85
RBM39-208ENST00000416108 MAP3K11Q16584 847 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 TMTC3Q6ZXV5 915 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 CCDC84Q86UT8 332 aaPredicted RBP9.76□□□□□ -0.85
RBM39-208ENST00000416108 ZNF280CQ8ND82 737 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 NSUN7Q8NE18 718 aaKnown RBP9.76□□□□□ -0.85
RBM39-208ENST00000416108 WASF1Q92558 559 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 DDX11Q96FC9 970 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 VCPKMTQ9H867 229 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 ELP3Q9H9T3 547 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 TMOD4Q9NZQ9 345 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.76□□□□□ -0.85
RBM39-208ENST00000416108 SNCAIPQ9Y6H5 919 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 COL11A1P12107 1806 aaPredicted RBP9.76□□□□□ -0.85
RBM39-208ENST00000416108 FRMPD2Q68DX3 1309 aaPredicted RBP9.76□□□□□ -0.85
RBM39-208ENST00000416108 STK36Q9NRP7 1315 aa9.76□□□□□ -0.85
RBM39-208ENST00000416108 C19orf81C9J6K1 198 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 KLRF2D3W0D1 207 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 UBE2Q2LH0YL09 131 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 NDUFB10O96000 172 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 BMP3P12645 472 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 PDIA4P13667 645 aaKnown RBP9.75□□□□□ -0.85
RBM39-208ENST00000416108 IFNAR1P17181 557 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 PDCP20941 246 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 ZNF543Q08ER8 600 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 ST3GAL1Q11201 340 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 SPP2Q13103 211 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 USP17L2Q6R6M4 530 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms