RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PRKAB2O43741 272 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 CDC25BP30305 580 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 SETDB1Q15047 1291 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 ZMYM1Q5SVZ6 1142 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 WDR24Q96S15 920 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 PCDHB6Q9Y5E3 794 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 E7EVH7 732 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 MYO1CO00159 1063 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 ST5P78524 1137 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 E4F1Q66K89 784 aaPredicted RBP14.34□□□□□ -0.11
SCN1B-202ENST00000415950 SPATA24Q86W54 205 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 RSRC1Q96IZ7 334 aaKnown RBP14.34□□□□□ -0.11
SCN1B-202ENST00000415950 SRGAP2O75044 1071 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 PSMC4P43686 418 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 IFNL3Q8IZI9 196 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 POLR3EQ9NVU0 708 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 USP17L12C9JPN9 530 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 USP17L21D6R901 530 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 TRIM66O15016 1216 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 CCNT1O60563 726 aaKnown RBP14.34□□□□□ -0.11
SCN1B-202ENST00000415950 IGKV5-2P06315 115 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 PCK1P35558 622 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 SF3B2Q13435 895 aaKnown RBP14.34□□□□□ -0.11
SCN1B-202ENST00000415950 MORC3Q14149 939 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 TTLL12Q14166 644 aaPredicted RBP14.34□□□□□ -0.11
SCN1B-202ENST00000415950 GPKOWQ92917 476 aaPredicted RBP eCLIP14.34□□□□□ -0.11
SCN1B-202ENST00000415950 NLRP3Q96P20 1036 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 KDRP35968 1356 aa14.34□□□□□ -0.11
SCN1B-202ENST00000415950 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 TRPM1Q7Z4N2 1603 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 SPDYE3A6NKU9 549 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 ATP6V1AP38606 617 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 BCAMP50895 628 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 LLGL1Q15334 1064 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 GOLGA5Q8TBA6 731 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 NGLY1Q96IV0 654 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 MAN1B1Q9UKM7 699 aa14.33□□□□□ -0.11
SCN1B-202ENST00000415950 A0A0G2JLW4 131 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 SPOPO43791 374 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 RNF40O75150 1001 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.12
SCN1B-202ENST00000415950 INTS8Q75QN2 995 aaKnown RBP14.33□□□□□ -0.12
SCN1B-202ENST00000415950 B4GALNT4Q76KP1 1039 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 VSTM4Q8IW00 320 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 GSPT2Q8IYD1 628 aaKnown RBP14.33□□□□□ -0.12
SCN1B-202ENST00000415950 NKIRAS1Q9NYS0 192 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 SLC7A5Q01650 507 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 SPATA1Q5VX52 437 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 RRP36Q96EU6 259 aaKnown RBP14.33□□□□□ -0.12
SCN1B-202ENST00000415950 TTC37Q6PGP7 1564 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 IQCB1Q15051 598 aa14.33□□□□□ -0.12
SCN1B-202ENST00000415950 FMR1NBQ8N0W7 255 aaPredicted RBP14.33□□□□□ -0.12
SCN1B-202ENST00000415950 ARHGEF10O15013 1369 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 A0A1B0GUA9 196 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 CLNS1AP54105 237 aaKnown RBP14.32□□□□□ -0.12
SCN1B-202ENST00000415950 STOX1Q6ZVD7 989 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 SPATA5Q8NB90 893 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 TEX33O43247 280 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 GNA11P29992 359 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 SV2BQ7L1I2 683 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 BAIAP2L1Q9UHR4 511 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 MORC2Q9Y6X9 1032 aaPredicted RBP14.32□□□□□ -0.12
SCN1B-202ENST00000415950 TNKSO95271 1327 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 GOLGA8HP0CJ92 632 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 RFC4P35249 363 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 MAP3K9P80192 1104 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 CASP8Q14790 479 aa14.32□□□□□ -0.12
SCN1B-202ENST00000415950 DHX40Q8IX18 779 aaKnown RBP14.32□□□□□ -0.12
SCN1B-202ENST00000415950 FRMD3A2A2Y4 597 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 ECM2O94769 699 aaPredicted RBP14.31□□□□□ -0.12
SCN1B-202ENST00000415950 CC2D1AQ6P1N0 951 aaPredicted RBP14.31□□□□□ -0.12
SCN1B-202ENST00000415950 TACO1Q9BSH4 297 aaKnown RBP14.31□□□□□ -0.12
SCN1B-202ENST00000415950 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCN1B-202ENST00000415950 MTUS1Q9ULD2 1270 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 CCDC151A5D8V7 595 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 INF2Q27J81 1249 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 CEP85LQ5SZL2 805 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 NAA35Q5VZE5 725 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 CCDC26Q8TAB7 109 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 C19orf44Q9H6X5 657 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 GREM2Q9H772 168 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 SLC39A2Q9NP94 309 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 GPCPD1Q9NPB8 672 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 HARSP12081 509 aaKnown RBP14.31□□□□□ -0.12
SCN1B-202ENST00000415950 PLCD1P51178 756 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 DAAM2Q86T65 1068 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 USP37Q86T82 979 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 ZNF354CQ86Y25 554 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 IMPG2Q9BZV3 1241 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 ZSWIM5Q9P217 1185 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 CYP2D7A0A087X1C5 515 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 B4DLN1 442 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 GNAT2P19087 354 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 CCZ1BP86790 482 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 CCZ1P86791 482 aaPredicted RBP14.31□□□□□ -0.12
SCN1B-202ENST00000415950 FERMT1Q9BQL6 677 aa14.31□□□□□ -0.12
SCN1B-202ENST00000415950 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.31□□□□□ -0.12
SCN1B-202ENST00000415950 IKBKBO14920 756 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms