RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 CNMDO75829 334 aa29.91■■■□□ 2.38
HLA-C-204ENST00000415537 WDR78Q5VTH9 848 aa29.91■■■□□ 2.38
HLA-C-204ENST00000415537 PAK6Q9NQU5 681 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-204ENST00000415537 TMX2Q9Y320 296 aa29.91■■■□□ 2.38
HLA-C-204ENST00000415537 XRCC5P13010 732 aaKnown RBP29.9■■■□□ 2.38
HLA-C-204ENST00000415537 RGS2P41220 211 aa29.9■■■□□ 2.38
HLA-C-204ENST00000415537 ATP2B2Q01814 1243 aa29.9■■■□□ 2.38
HLA-C-204ENST00000415537 HDAC1Q13547 482 aaPredicted RBP29.9■■■□□ 2.38
HLA-C-204ENST00000415537 AAMPQ13685 434 aa29.9■■■□□ 2.38
HLA-C-204ENST00000415537 CLEC10AQ8IUN9 316 aa29.9■■■□□ 2.38
HLA-C-204ENST00000415537 TRMT44Q8IYL2 757 aaKnown RBP29.9■■■□□ 2.38
HLA-C-204ENST00000415537 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.9■■■□□ 2.38
HLA-C-204ENST00000415537 KANSL2Q9H9L4 492 aa29.9■■■□□ 2.38
HLA-C-204ENST00000415537 MKNK2Q9HBH9 465 aa29.9■■■□□ 2.38
HLA-C-204ENST00000415537 HMX1Q9NP08 348 aaPredicted RBP29.9■■■□□ 2.38
HLA-C-204ENST00000415537 M0R2C6 588 aa29.89■■■□□ 2.38
HLA-C-204ENST00000415537 TDO2P48775 406 aa29.89■■■□□ 2.38
HLA-C-204ENST00000415537 STK11IPQ8N1F8 1099 aa29.89■■■□□ 2.38
HLA-C-204ENST00000415537 TRIB2Q92519 343 aa29.89■■■□□ 2.38
HLA-C-204ENST00000415537 VCPKMTQ9H867 229 aa29.89■■■□□ 2.38
HLA-C-204ENST00000415537 BTBD7Q9P203 1132 aa29.89■■■□□ 2.38
HLA-C-204ENST00000415537 RPTORQ8N122 1335 aa29.89■■■□□ 2.38
HLA-C-204ENST00000415537 FARP2O94887 1054 aaPredicted RBP29.88■■■□□ 2.37
HLA-C-204ENST00000415537 SIAH1Q8IUQ4 282 aa29.88■■■□□ 2.37
HLA-C-204ENST00000415537 SPICE1Q8N0Z3 855 aa29.88■■■□□ 2.37
HLA-C-204ENST00000415537 IVNS1ABPQ9Y6Y0 642 aa29.88■■■□□ 2.37
HLA-C-204ENST00000415537 PATL2C9JE40 543 aaKnown RBP29.87■■■□□ 2.37
HLA-C-204ENST00000415537 EEF2P13639 858 aaKnown RBP29.87■■■□□ 2.37
HLA-C-204ENST00000415537 ZKSCAN1P17029 563 aaPredicted RBP29.87■■■□□ 2.37
HLA-C-204ENST00000415537 MORN1Q5T089 497 aa29.87■■■□□ 2.37
HLA-C-204ENST00000415537 DPF3Q92784 378 aa29.87■■■□□ 2.37
HLA-C-204ENST00000415537 HTATIP2Q9BUP3 242 aa29.87■■■□□ 2.37
HLA-C-204ENST00000415537 TRIM32Q13049 653 aa29.86■■■□□ 2.37
HLA-C-204ENST00000415537 KIAA1755Q5JYT7 1200 aa29.86■■■□□ 2.37
HLA-C-204ENST00000415537 USP6NLQ92738 828 aa29.86■■■□□ 2.37
HLA-C-204ENST00000415537 NACAP1Q9BZK3 213 aa29.86■■■□□ 2.37
HLA-C-204ENST00000415537 ZNF287Q9HBT7 754 aa29.86■■■□□ 2.37
HLA-C-204ENST00000415537 WDR46O15213 610 aaKnown RBP29.85■■■□□ 2.37
HLA-C-204ENST00000415537 FLOT1O75955 427 aa29.85■■■□□ 2.37
HLA-C-204ENST00000415537 UBE2Q1Q7Z7E8 422 aa29.85■■■□□ 2.37
HLA-C-204ENST00000415537 SEC62Q99442 399 aaKnown RBP29.85■■■□□ 2.37
HLA-C-204ENST00000415537 APBA2Q99767 749 aa29.85■■■□□ 2.37
HLA-C-204ENST00000415537 EPB41L4AQ9HCS5 686 aaPredicted RBP29.85■■■□□ 2.37
HLA-C-204ENST00000415537 GOPCQ9HD26 462 aa29.85■■■□□ 2.37
HLA-C-204ENST00000415537 RAD21O60216 631 aa29.84■■■□□ 2.37
HLA-C-204ENST00000415537 MAP2K5Q13163 448 aa29.84■■■□□ 2.37
HLA-C-204ENST00000415537 IFNL3Q8IZI9 196 aa29.84■■■□□ 2.37
HLA-C-204ENST00000415537 MB21D1Q8N884 522 aa29.84■■■□□ 2.37
HLA-C-204ENST00000415537 CRISPLD2Q9H0B8 497 aa29.84■■■□□ 2.37
HLA-C-204ENST00000415537 SALL3Q9BXA9 1300 aa29.84■■■□□ 2.37
HLA-C-204ENST00000415537 RLFQ13129 1914 aa29.84■■■□□ 2.37
HLA-C-204ENST00000415537 ROBO3Q96MS0 1386 aa29.83■■■□□ 2.37
HLA-C-204ENST00000415537 SLC15A5A6NIM6 579 aa29.83■■■□□ 2.37
HLA-C-204ENST00000415537 PRKAR2AP13861 404 aaKnown RBP29.83■■■□□ 2.37
HLA-C-204ENST00000415537 PTPREP23469 700 aa29.83■■■□□ 2.37
HLA-C-204ENST00000415537 DSG3P32926 999 aa29.83■■■□□ 2.37
HLA-C-204ENST00000415537 ZMYM1Q5SVZ6 1142 aa29.83■■■□□ 2.37
HLA-C-204ENST00000415537 SAMD1Q6SPF0 538 aaPredicted RBP29.83■■■□□ 2.37
HLA-C-204ENST00000415537 RASA1P20936 1047 aa29.82■■■□□ 2.36
HLA-C-204ENST00000415537 ZNF444Q8N0Y2 327 aaPredicted RBP29.82■■■□□ 2.36
HLA-C-204ENST00000415537 RWDD1Q9H446 243 aaPredicted RBP29.82■■■□□ 2.36
HLA-C-204ENST00000415537 PLS1Q14651 629 aa29.81■■■□□ 2.36
HLA-C-204ENST00000415537 CCL14Q16627 93 aa29.81■■■□□ 2.36
HLA-C-204ENST00000415537 EVI5LQ96CN4 794 aa29.81■■■□□ 2.36
HLA-C-204ENST00000415537 SPATC1LQ9H0A9 340 aa29.81■■■□□ 2.36
HLA-C-204ENST00000415537 NAPBQ9H115 298 aa29.81■■■□□ 2.36
HLA-C-204ENST00000415537 STAP2Q9UGK3 403 aa29.81■■■□□ 2.36
HLA-C-204ENST00000415537 GREB1LQ9C091 1923 aaPredicted RBP29.81■■■□□ 2.36
HLA-C-204ENST00000415537 PDE1AP54750 535 aa29.8■■■□□ 2.36
HLA-C-204ENST00000415537 MAP3K21Q5TCX8 1036 aa29.8■■■□□ 2.36
HLA-C-204ENST00000415537 MOV10L1Q9BXT6 1211 aaKnown RBP29.8■■■□□ 2.36
HLA-C-204ENST00000415537 PARP14Q460N5 1801 aa29.8■■■□□ 2.36
HLA-C-204ENST00000415537 A0A0G2JMZ2 1700 aa29.79■■■□□ 2.36
HLA-C-204ENST00000415537 SLC3A2P08195 630 aaKnown RBP29.79■■■□□ 2.36
HLA-C-204ENST00000415537 CACNB2Q08289 660 aaPredicted RBP29.79■■■□□ 2.36
HLA-C-204ENST00000415537 GRB14Q14449 540 aa29.79■■■□□ 2.36
HLA-C-204ENST00000415537 ANKLE1Q8NAG6 615 aa29.79■■■□□ 2.36
HLA-C-204ENST00000415537 ATG4CQ96DT6 458 aa29.79■■■□□ 2.36
HLA-C-204ENST00000415537 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.79■■■□□ 2.36
HLA-C-204ENST00000415537 STRNO43815 780 aa29.78■■■□□ 2.36
HLA-C-204ENST00000415537 SLC34A2O95436 690 aa29.78■■■□□ 2.36
HLA-C-204ENST00000415537 SHCBP1Q8NEM2 672 aa29.78■■■□□ 2.36
HLA-C-204ENST00000415537 NYAP2Q9P242 653 aa29.78■■■□□ 2.36
HLA-C-204ENST00000415537 MYH4Q9Y623 1939 aa29.78■■■□□ 2.36
HLA-C-204ENST00000415537 H0YGN5 161 aa29.77■■■□□ 2.36
HLA-C-204ENST00000415537 PRDM1O75626 825 aa29.77■■■□□ 2.36
HLA-C-204ENST00000415537 ERCC3P19447 782 aa29.77■■■□□ 2.36
HLA-C-204ENST00000415537 PDE4BQ07343 736 aa29.77■■■□□ 2.36
HLA-C-204ENST00000415537 MFSD14CQ5VZR4 134 aa29.77■■■□□ 2.36
HLA-C-204ENST00000415537 NECAB2Q7Z6G3 386 aa29.77■■■□□ 2.36
HLA-C-204ENST00000415537 DPP9Q86TI2 863 aa29.77■■■□□ 2.36
HLA-C-204ENST00000415537 PAWRQ96IZ0 340 aaKnown RBP29.77■■■□□ 2.36
HLA-C-204ENST00000415537 LNPKQ9C0E8 428 aa29.77■■■□□ 2.36
HLA-C-204ENST00000415537 COL11A1P12107 1806 aaPredicted RBP29.76■■■□□ 2.35
HLA-C-204ENST00000415537 NCAPG2Q86XI2 1143 aa29.76■■■□□ 2.35
HLA-C-204ENST00000415537 MROH8Q9H579 483 aa29.76■■■□□ 2.35
HLA-C-204ENST00000415537 FAM83BQ5T0W9 1011 aa29.75■■■□□ 2.35
HLA-C-204ENST00000415537 B4GALNT3Q6L9W6 998 aa29.75■■■□□ 2.35
HLA-C-204ENST00000415537 CLIP2Q9UDT6 1046 aa29.75■■■□□ 2.35
HLA-C-204ENST00000415537 NR2E3Q9Y5X4 410 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms