RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 B8ZZF3 427 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 CHL1O00533 1208 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 TBX3O15119 743 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 RNASEH2AO75792 299 aaKnown RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 ABL1P00519 1130 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 RPN1P04843 607 aaKnown RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 RPLP1P05386 114 aaKnown RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 POLR3DP05423 398 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 RPL17P18621 184 aaKnown RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 AMPD3Q01432 767 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 FKBP4Q02790 459 aaKnown RBP eCLIP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 CCDC93Q567U6 631 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 DNTTIP2Q5QJE6 756 aaKnown RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 CCDC70Q6NSX1 233 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 FDX2Q6P4F2 183 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 ATG4DQ86TL0 474 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 LCA5Q86VQ0 697 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 CILP2Q8IUL8 1156 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 SIAH1Q8IUQ4 282 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 CHCHD4Q8N4Q1 142 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 TMEM102Q8N9M5 508 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 TEX19Q8NA77 164 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 PMFBP1Q8TBY8 1022 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 SNX29Q8TEQ0 813 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 SMARCC1Q92922 1105 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-203ENST00000414174 ERP27Q96DN0 273 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 CDHR1Q96JP9 859 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 OSMRQ99650 979 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 BACH2Q9BYV9 841 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 TMX1Q9H3N1 280 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 OSGEPQ9NPF4 335 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 RAPGEFL1Q9UHV5 662 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 TMCC3Q9ULS5 477 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 ZNF652Q9Y2D9 606 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 PRKAB1Q9Y478 270 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 CEP83Q9Y592 693 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 WASHC2CQ9Y4E1 1318 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 RAD54L2Q9Y4B4 1467 aa4.36□□□□□ -1.71
SF3B1-203ENST00000414174 CTAGE5O15320 804 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 GAS2O43903 313 aaKnown RBP4.35□□□□□ -1.71
SF3B1-203ENST00000414174 ICMTO60725 284 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 PHACTR2O75167 634 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 FAM13AO94988 1023 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 DLGAP3O95886 979 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 IGHA2P01877 340 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 HNRNPCP07910 306 aaKnown RBP eCLIP4.35□□□□□ -1.71
SF3B1-203ENST00000414174 PAX7P23759 505 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 RRM1P23921 792 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 TRAPPC10P48553 1259 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 ARHGAP4P98171 946 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 MRPL58Q14197 206 aaKnown RBP4.35□□□□□ -1.71
SF3B1-203ENST00000414174 C9orf131Q5VYM1 1079 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 ALKBH2Q6NS38 261 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 PAOXQ6QHF9 649 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 PRPF38AQ8NAV1 312 aaKnown RBP4.35□□□□□ -1.71
SF3B1-203ENST00000414174 AGAP3Q96P47 875 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 IER2Q9BTL4 223 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 BHLHE41Q9C0J9 482 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-203ENST00000414174 ZNF700Q9H0M5 742 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 AS3MTQ9HBK9 375 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 CLIC5Q9NZA1 410 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 STK26Q9P289 416 aa4.35□□□□□ -1.71
SF3B1-203ENST00000414174 FAM95CA0A1B0GW59 222 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 A0A1W2PRQ8 180 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 KLHL33A6NCF5 533 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 H3BRB1 525 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 MPHOSPH10O00566 681 aaKnown RBP4.34□□□□□ -1.71
SF3B1-203ENST00000414174 SOX1O00570 391 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-203ENST00000414174 KIF5CO60282 957 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 CAND2O75155 1236 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 NBPF7P0C2Y1 421 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-203ENST00000414174 CCDC159P0C7I6 412 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 NAT2P11245 290 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 XRCC5P13010 732 aaKnown RBP4.34□□□□□ -1.71
SF3B1-203ENST00000414174 PCSK2P16519 638 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 PSMA3P25788 255 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 TSPAN7P41732 249 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 NAP1L1P55209 391 aaKnown RBP4.34□□□□□ -1.71
SF3B1-203ENST00000414174 NLRP12P59046 1061 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 PIP4K2BP78356 416 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 MESP2Q0VG99 397 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 TAF11Q15544 211 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 SGO2Q562F6 1265 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 USPL1Q5W0Q7 1092 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 C16orf87Q6PH81 154 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 METTL16Q86W50 562 aaKnown RBP4.34□□□□□ -1.71
SF3B1-203ENST00000414174 TTC30AQ86WT1 665 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 RELL1Q8IUW5 271 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 IQCF2Q8IXL9 164 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 SHISA5Q8N114 240 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 FAM84AQ96KN4 292 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 TOX2Q96NM4 488 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 RUSC1Q9BVN2 902 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 TGIF2Q9GZN2 237 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 NRSN2Q9GZP1 204 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 TUT1Q9H6E5 874 aaKnown RBP4.34□□□□□ -1.71
SF3B1-203ENST00000414174 ZFYVE28Q9HCC9 887 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 UTP6Q9NYH9 597 aaKnown RBP4.34□□□□□ -1.71
SF3B1-203ENST00000414174 EGFL7Q9UHF1 273 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 MAFFQ9ULX9 164 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms