RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ZFYP08048 801 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 GUCY1A2P33402 732 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 SLFNL1Q499Z3 407 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 C12orf60Q5U649 245 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 HTATIP2Q9BUP3 242 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 ARHGEF10LQ9HCE6 1279 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 DIAPH3Q9NSV4 1193 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 MKI67P46013 3256 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 DDX60LQ5H9U9 1706 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 CYP2D6P10635 497 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 RBM25P49756 843 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 LBX2Q6XYB7 198 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 DEFB118Q96PH6 123 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 PUS7LQ9H0K6 701 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 RPAP3Q9H6T3 665 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 PAK6Q9NQU5 681 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 ARPP21Q9UBL0 812 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 RAD50Q92878 1312 aa20.1■□□□□ 0.81
SCAMP4-204ENST00000414057 TFRCP02786 760 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-204ENST00000414057 XRCC5P13010 732 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-204ENST00000414057 DYNLL2Q96FJ2 89 aa20.1■□□□□ 0.81
SCAMP4-204ENST00000414057 HMX1Q9NP08 348 aaPredicted RBP20.1■□□□□ 0.81
SCAMP4-204ENST00000414057 CYP2B6P20813 491 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 RGS2P41220 211 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 CDK8P49336 464 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 Q3C1V9 767 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 GIMAP6Q6P9H5 292 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 C16orf86Q6ZW13 317 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 GPR142Q7Z601 462 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 PLEKHH3Q7Z736 793 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 SLC44A5Q8NCS7 719 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 APPBP2Q92624 585 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 LPAR1Q92633 364 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 HOXC10Q9NYD6 342 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 RPTORQ8N122 1335 aa20.09■□□□□ 0.81
SCAMP4-204ENST00000414057 RNF113AO15541 343 aaKnown RBP20.08■□□□□ 0.81
SCAMP4-204ENST00000414057 FARP2O94887 1054 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-204ENST00000414057 GNAT2P19087 354 aa20.08■□□□□ 0.81
SCAMP4-204ENST00000414057 ICA1Q05084 483 aa20.08■□□□□ 0.81
SCAMP4-204ENST00000414057 COG2Q14746 738 aa20.08■□□□□ 0.81
SCAMP4-204ENST00000414057 DPF3Q92784 378 aa20.08■□□□□ 0.81
SCAMP4-204ENST00000414057 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.08■□□□□ 0.814e-6■■■□□ 15.2
SCAMP4-204ENST00000414057 PORCNQ9H237 461 aa20.08■□□□□ 0.81
SCAMP4-204ENST00000414057 SGSM2O43147 1006 aa20.07■□□□□ 0.8
SCAMP4-204ENST00000414057 CHGBP05060 677 aa20.07■□□□□ 0.8
SCAMP4-204ENST00000414057 EVX2Q03828 476 aa20.07■□□□□ 0.8
SCAMP4-204ENST00000414057 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
SCAMP4-204ENST00000414057 STRBPQ96SI9 672 aaKnown RBP20.07■□□□□ 0.8
SCAMP4-204ENST00000414057 IVNS1ABPQ9Y6Y0 642 aa20.07■□□□□ 0.8
SCAMP4-204ENST00000414057 A0A1W2PRG0 241 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 PEX10O60683 326 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 AKR1B1P15121 316 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 ZKSCAN1P17029 563 aaPredicted RBP20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 UBE2Q1Q7Z7E8 422 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 USP26Q9BXU7 913 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 CRISPLD2Q9H0B8 497 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 KANSL2Q9H9L4 492 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 TMX2Q9Y320 296 aa20.06■□□□□ 0.8
SCAMP4-204ENST00000414057 SPDYE16A6NNV3 312 aaPredicted RBP20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 SBK1Q52WX2 424 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 MORN1Q5T089 497 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 WDR78Q5VTH9 848 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 ANKLE1Q8NAG6 615 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 TRIB2Q92519 343 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 APBA2Q99767 749 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 CYP2D7A0A087X1C5 515 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 CNMDO75829 334 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 MB21D1Q8N884 522 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 OSBP2Q969R2 916 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 VCPKMTQ9H867 229 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 NR2E3Q9Y5X4 410 aa20.05■□□□□ 0.8
SCAMP4-204ENST00000414057 MAP2K5Q13163 448 aa20.04■□□□□ 0.8
SCAMP4-204ENST00000414057 POTEEQ6S8J3 1075 aa20.04■□□□□ 0.8
SCAMP4-204ENST00000414057 CWC27Q6UX04 472 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-204ENST00000414057 KIAA1211Q6ZU35 1233 aa20.04■□□□□ 0.8
SCAMP4-204ENST00000414057 USP6NLQ92738 828 aa20.04■□□□□ 0.8
SCAMP4-204ENST00000414057 MKNK2Q9HBH9 465 aa20.04■□□□□ 0.8
SCAMP4-204ENST00000414057 SLC15A5A6NIM6 579 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 GSG1L2A8MUP6 293 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 WDR46O15213 610 aaKnown RBP20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 GPAA1O43292 621 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 APPP05067 770 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 PTPREP23469 700 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 MCCP23508 829 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 MAP3K21Q5TCX8 1036 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 NECAB2Q7Z6G3 386 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 GOPCQ9HD26 462 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 ANO2Q9NQ90 1003 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 BTBD7Q9P203 1132 aa20.03■□□□□ 0.8
SCAMP4-204ENST00000414057 MYH7P12883 1935 aa20.02■□□□□ 0.8
SCAMP4-204ENST00000414057 MINDY4BA8MYZ0 360 aa20.02■□□□□ 0.8
SCAMP4-204ENST00000414057 FLOT1O75955 427 aa20.02■□□□□ 0.8
SCAMP4-204ENST00000414057 PRKAR2AP13861 404 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-204ENST00000414057 TDO2P48775 406 aa20.02■□□□□ 0.8
SCAMP4-204ENST00000414057 ATP2B2Q01814 1243 aa20.02■□□□□ 0.8
SCAMP4-204ENST00000414057 NACAP1Q9BZK3 213 aa20.02■□□□□ 0.8
SCAMP4-204ENST00000414057 DOCK3Q8IZD9 2030 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms