RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 FGD1P98174 961 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 APOBRQ0VD83 1088 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 CLEC10AQ8IUN9 316 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 ZNF654Q8IZM8 581 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 ZKSCAN4Q969J2 545 aaPredicted RBP13.59□□□□□ -0.23
HDAC9-206ENST00000413380 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
HDAC9-206ENST00000413380 PICK1Q9NRD5 415 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
HDAC9-206ENST00000413380 TPCN1Q9ULQ1 816 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 STX8Q9UNK0 236 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 HPS5Q9UPZ3 1129 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 CSADQ9Y600 493 aa13.59□□□□□ -0.23
HDAC9-206ENST00000413380 KLF18A0A0U1RQI7 1052 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 CCDC69A6NI79 296 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 SPDYE5A6NIY4 337 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
HDAC9-206ENST00000413380 PDIA3P30101 505 aaKnown RBP13.58□□□□□ -0.24
HDAC9-206ENST00000413380 RAB3GAP1Q15042 981 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 PPP2R5BQ15173 497 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 ERO1BQ86YB8 467 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 PNMA1Q8ND90 353 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 KIAA1683Q9H0B3 1180 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 SH2D4AQ9H788 454 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 KAT14Q9H8E8 782 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 ARHGEF10LQ9HCE6 1279 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 SLC12A7Q9Y666 1083 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 RLFQ13129 1914 aa13.58□□□□□ -0.24
HDAC9-206ENST00000413380 PFKFB2O60825 505 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 CALM1P0DP23 149 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 CALM2P0DP24 149 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 CALM3P0DP25 149 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
HDAC9-206ENST00000413380 PPATQ06203 517 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 CUL4AQ13619 759 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 PRKG1Q13976 671 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 ME3Q16798 604 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 MOB2Q70IA6 237 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 CATIPQ7Z7H3 387 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 C2orf69Q8N8R5 385 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 ZNF280CQ8ND82 737 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 ACER1Q8TDN7 264 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 GMCL1Q96IK5 515 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 TMX3Q96JJ7 454 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 AS3MTQ9HBK9 375 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 CLIP2Q9UDT6 1046 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 AFG3L2Q9Y4W6 797 aa13.57□□□□□ -0.24
HDAC9-206ENST00000413380 BAZ2BQ9UIF8 2168 aaKnown RBP13.56□□□□□ -0.24
HDAC9-206ENST00000413380 GOLGA8BA8MQT2 603 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 UBE2Q2LH0YL09 131 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 ZBTB43O43298 467 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 LARGE1O95461 756 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 PDHBP11177 359 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 ST3GAL1Q11201 340 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 PPIL2Q13356 520 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 SH3D19Q5HYK7 790 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 HSCBQ8IWL3 235 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 HHIPL1Q96JK4 782 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 CLMNQ96JQ2 1002 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 C12orf42Q96LP6 360 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 VCPKMTQ9H867 229 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.56□□□□□ -0.24
HDAC9-206ENST00000413380 KCNH4Q9UQ05 1017 aa13.56□□□□□ -0.24
HDAC9-206ENST00000413380 C19orf81C9J6K1 198 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 ECE1P42892 770 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 USP14P54578 494 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 BACE1P56817 501 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-206ENST00000413380 BECN1Q14457 450 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 GRM4Q14833 912 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 NFXL1Q6ZNB6 911 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 SAPCD2Q86UD0 394 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 LRRC47Q8N1G4 583 aaKnown RBP13.55□□□□□ -0.24
HDAC9-206ENST00000413380 DCAF4Q8WV16 495 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 LPAR1Q92633 364 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 CHMP4CQ96CF2 233 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 ZNF408Q9H9D4 720 aa13.55□□□□□ -0.24
HDAC9-206ENST00000413380 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-206ENST00000413380 CCDC196A0A1B0GTZ2 297 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 PALM3A6NDB9 673 aaPredicted RBP13.54□□□□□ -0.24
HDAC9-206ENST00000413380 USP17L10C9JJH3 530 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 F5H6K3 240 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 CXCL11O14625 94 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 PLA2G6O60733 806 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 NDUFB10O96000 172 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 SMARCA1P28370 1054 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 KIF5BP33176 963 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 METAP2P50579 478 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC9-206ENST00000413380 KLRC3Q07444 240 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 SCRN1Q12765 414 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 NTRK3Q16288 839 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 CCDC84Q86UT8 332 aaPredicted RBP13.54□□□□□ -0.24
HDAC9-206ENST00000413380 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 FANCBQ8NB91 859 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 INTS4Q96HW7 963 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms