RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 MCM7P33993 719 aa9.66□□□□□ -0.86
SYNE1-211ENST00000413186 FKBP1AP62942 108 aaKnown RBP9.66□□□□□ -0.86
SYNE1-211ENST00000413186 KRT26Q7Z3Y9 468 aa9.66□□□□□ -0.86
SYNE1-211ENST00000413186 PDILTQ8N807 584 aa9.66□□□□□ -0.86
SYNE1-211ENST00000413186 NEDD1Q8NHV4 660 aa9.66□□□□□ -0.86
SYNE1-211ENST00000413186 BRPF3Q9ULD4 1205 aa9.66□□□□□ -0.86
SYNE1-211ENST00000413186 DKC1O60832 514 aaKnown RBP eCLIP9.65□□□□□ -0.86
SYNE1-211ENST00000413186 GH2P01242 217 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 CYP2D6P10635 497 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 OSBPP22059 807 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 STAT6P42226 847 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 PIK3AP1Q6ZUJ8 805 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 PNMA8AQ86V59 439 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-211ENST00000413186 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 SMARCE1Q969G3 411 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 FRMPD2Q68DX3 1309 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-211ENST00000413186 CFBP00751 764 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 TTC38Q5R3I4 469 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 JAKMIP3Q5VZ66 844 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 ANO1Q5XXA6 986 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 CDC42EP5Q6NZY7 148 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 CCDC174Q6PII3 467 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 TBC1D10CQ8IV04 446 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 CCAR2Q8N163 923 aaKnown RBP9.65□□□□□ -0.86
SYNE1-211ENST00000413186 DCAF4Q8WV16 495 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 VPS54Q9P1Q0 977 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 ZNF70Q9UC06 446 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-211ENST00000413186 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-211ENST00000413186 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 FLT1P17948 1338 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 SYCE3A1L190 88 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 USP17L5A8MUK1 530 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 TBCAO75347 108 aaKnown RBP9.65□□□□□ -0.86
SYNE1-211ENST00000413186 SERPINC1P01008 464 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 IDEP14735 1019 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 KLRK1P26718 216 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 MARCKSP29966 332 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-211ENST00000413186 USH1GQ495M9 461 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 BLIDQ8IZY5 108 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 VGLL2Q8N8G2 317 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 MNS1Q8NEH6 495 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 SCLT1Q96NL6 688 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 PSTPIP2Q9H939 334 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 MYOZ2Q9NPC6 264 aa9.65□□□□□ -0.86
SYNE1-211ENST00000413186 OFD1O75665 1012 aa9.65□□□□□ -0.87
SYNE1-211ENST00000413186 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.87
SYNE1-211ENST00000413186 BRDTQ58F21 947 aaPredicted RBP9.65□□□□□ -0.87
SYNE1-211ENST00000413186 CKAP2LQ8IYA6 745 aa9.65□□□□□ -0.87
SYNE1-211ENST00000413186 SCRN1Q12765 414 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 CAMK4Q16566 473 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
SYNE1-211ENST00000413186 ZDHHC15Q96MV8 337 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 PCDHA1Q9Y5I3 950 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 COL22A1Q8NFW1 1626 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-211ENST00000413186 SALL3Q9BXA9 1300 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 SCN11AQ9UI33 1791 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 GOLGA8HP0CJ92 632 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 STAT2P52630 851 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 CUL4AQ13619 759 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 RASA3Q14644 834 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 LRSAM1Q6UWE0 723 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 MB21D2Q8IYB1 491 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-211ENST00000413186 IQUBQ8NA54 791 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 WRNIP1Q96S55 665 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 GCOM1H8Y6P7 765 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-211ENST00000413186 FMNL1O95466 1100 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-211ENST00000413186 POLR2MP0CAP2 368 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 ALAS1P13196 640 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 PLCD1P51178 756 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 RRAGBQ5VZM2 374 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 TXNRD3Q86VQ6 643 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 FBXO18Q8NFZ0 1043 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 ALDH8A1Q9H2A2 487 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-211ENST00000413186 GINM1Q9NU53 330 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 ARHGEF6Q15052 776 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 C9orf131Q5VYM1 1079 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 HAUS3Q68CZ6 603 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 FERMT2Q96AC1 680 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 PANK2Q9BZ23 570 aa9.64□□□□□ -0.87
SYNE1-211ENST00000413186 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.64□□□□□ -0.87
SYNE1-211ENST00000413186 YEATS4O95619 227 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 CXCL9Q07325 125 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 ZNF174Q15697 407 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 UBA5Q9GZZ9 404 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 CCPG1Q9ULG6 757 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 PRPF3O43395 683 aaKnown RBP9.63□□□□□ -0.87
SYNE1-211ENST00000413186 CCDC175P0C221 793 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 FDX1P10109 184 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 NLRX1Q86UT6 975 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 PROM2Q8N271 834 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 PAGR1Q9BTK6 254 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 KCNJ14Q9UNX9 436 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 PLCH1Q4KWH8 1693 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 CUTAO60888 179 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 BRD1O95696 1058 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 GNPTABQ3T906 1256 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 SYDE2Q5VT97 1194 aa9.63□□□□□ -0.87
SYNE1-211ENST00000413186 NOSTRINQ8IVI9 506 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms