RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 E7EWF7 191 aa16.47■□□□□ 0.23
CPNE1-206ENST00000412056 SPICE1Q8N0Z3 855 aa16.47■□□□□ 0.23
CPNE1-206ENST00000412056 LRRC47Q8N1G4 583 aaKnown RBP16.47■□□□□ 0.23
CPNE1-206ENST00000412056 ZKSCAN3Q9BRR0 538 aa16.47■□□□□ 0.23
CPNE1-206ENST00000412056 KRT23Q9C075 422 aa16.47■□□□□ 0.23
CPNE1-206ENST00000412056 ASCC2Q9H1I8 757 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-206ENST00000412056 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
CPNE1-206ENST00000412056 A0A0G2JMZ2 1700 aa16.47■□□□□ 0.23
CPNE1-206ENST00000412056 RAD21O60216 631 aa16.46■□□□□ 0.23
CPNE1-206ENST00000412056 TLR2O60603 784 aa16.46■□□□□ 0.23
CPNE1-206ENST00000412056 REC8O95072 547 aa16.46■□□□□ 0.23
CPNE1-206ENST00000412056 PABPC4Q13310 644 aaKnown RBP eCLIP16.46■□□□□ 0.237e-7■■■□□ 14.8
CPNE1-206ENST00000412056 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-206ENST00000412056 GOPCQ9HD26 462 aa16.46■□□□□ 0.23
CPNE1-206ENST00000412056 TCP11L1Q9NUJ3 509 aa16.46■□□□□ 0.23
CPNE1-206ENST00000412056 PNMA3Q9UL41 463 aa16.46■□□□□ 0.23
CPNE1-206ENST00000412056 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
CPNE1-206ENST00000412056 GPR25O00155 361 aa16.45■□□□□ 0.22
CPNE1-206ENST00000412056 HOXA7P31268 230 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-206ENST00000412056 NOVP48745 357 aa16.45■□□□□ 0.22
CPNE1-206ENST00000412056 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-206ENST00000412056 CYB5R4Q7L1T6 521 aa16.45■□□□□ 0.22
CPNE1-206ENST00000412056 LPAR1Q92633 364 aa16.45■□□□□ 0.22
CPNE1-206ENST00000412056 MKL1Q969V6 931 aa16.45■□□□□ 0.22
CPNE1-206ENST00000412056 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
CPNE1-206ENST00000412056 CPA4Q9UI42 421 aa16.45■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L15C9J2P7 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L13C9JLJ4 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L11C9JVI0 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L18D6R9N7 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L22D6RA61 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L17D6RBQ6 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L19D6RCP7 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L20D6RJB6 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 NDUFB10O96000 172 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 OSBPP22059 807 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 NT5C2P49902 561 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 USP17L24Q0WX57 530 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 TRDNQ13061 729 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 PPP4R3BQ5MIZ7 849 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 RCSD1Q6JBY9 416 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 CATSPERGQ6ZRH7 1159 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 RALYLQ86SE5 291 aaKnown RBP16.44■□□□□ 0.22
CPNE1-206ENST00000412056 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 SMCR8Q8TEV9 937 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-206ENST00000412056 ZNF296Q8WUU4 475 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-206ENST00000412056 SYNPO2Q9UMS6 1093 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 DOCK3Q8IZD9 2030 aa16.44■□□□□ 0.22
CPNE1-206ENST00000412056 F5H6K3 240 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
CPNE1-206ENST00000412056 KLRC3Q07444 240 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 COL9A3Q14050 684 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-206ENST00000412056 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
CPNE1-206ENST00000412056 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 C17orf99Q6UX52 265 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 IQCA1Q86XH1 822 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 MB21D2Q8IYB1 491 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-206ENST00000412056 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 GMCL1P1Q8NEA9 526 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-206ENST00000412056 P2RX7Q99572 595 aaKnown RBP16.43■□□□□ 0.22
CPNE1-206ENST00000412056 TANGO6Q9C0B7 1094 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 TNKSO95271 1327 aa16.43■□□□□ 0.22
CPNE1-206ENST00000412056 FKTNO75072 461 aa16.42■□□□□ 0.22
CPNE1-206ENST00000412056 TOP1P11387 765 aaKnown RBP16.42■□□□□ 0.22
CPNE1-206ENST00000412056 HSPA4P34932 840 aa16.42■□□□□ 0.22
CPNE1-206ENST00000412056 ANTXR2P58335 489 aa16.42■□□□□ 0.22
CPNE1-206ENST00000412056 HERVK_113P62684 666 aa16.42■□□□□ 0.22
CPNE1-206ENST00000412056 CHMP4CQ96CF2 233 aa16.42■□□□□ 0.22
CPNE1-206ENST00000412056 ZSCAN10Q96SZ4 725 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-206ENST00000412056 TMEM47Q9BQJ4 181 aa16.42■□□□□ 0.22
CPNE1-206ENST00000412056 PRDM10Q9NQV6 1147 aa16.42■□□□□ 0.22
CPNE1-206ENST00000412056 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
CPNE1-206ENST00000412056 SPDYE16A6NNV3 312 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-206ENST00000412056 PEX10O60683 326 aa16.41■□□□□ 0.22
CPNE1-206ENST00000412056 BCRP11274 1271 aa16.41■□□□□ 0.22
CPNE1-206ENST00000412056 SLFN13Q68D06 897 aa16.41■□□□□ 0.22
CPNE1-206ENST00000412056 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
CPNE1-206ENST00000412056 ANKRD13CQ8N6S4 541 aa16.41■□□□□ 0.22
CPNE1-206ENST00000412056 ENAHQ8N8S7 591 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-206ENST00000412056 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
CPNE1-206ENST00000412056 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
CPNE1-206ENST00000412056 FBXO28Q9NVF7 368 aa16.41■□□□□ 0.22
CPNE1-206ENST00000412056 FLOT1O75955 427 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 CAP1Q01518 475 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 SP3Q02447 781 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 SEC23AQ15436 765 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 ADCK5Q3MIX3 580 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 TSGA10IPQ3SY00 556 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
CPNE1-206ENST00000412056 DGKHQ86XP1 1220 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 CD99L2Q8TCZ2 262 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 KCNB2Q92953 911 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 TTC14Q96N46 770 aa16.4■□□□□ 0.22
CPNE1-206ENST00000412056 MYH6P13533 1939 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 IFIT3O14879 490 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms