RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 ZNF594Q96JF6 807 aaPredicted RBP8.04□□□□□ -1.12
LINC00396-201ENST00000411690 ASCC2Q9H1I8 757 aaPredicted RBP8.04□□□□□ -1.12
LINC00396-201ENST00000411690 PRDM12Q9H4Q4 367 aa8.04□□□□□ -1.12
LINC00396-201ENST00000411690 MYH16Q9H6N6 1097 aa8.04□□□□□ -1.12
LINC00396-201ENST00000411690 DDX20Q9UHI6 824 aaKnown RBP8.04□□□□□ -1.12
LINC00396-201ENST00000411690 SUGT1Q9Y2Z0 365 aa8.04□□□□□ -1.12
LINC00396-201ENST00000411690 A0A1B0GUL6 1792 aa8.04□□□□□ -1.12
LINC00396-201ENST00000411690 PLXNB2O15031 1838 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 TRIM43BA6NCK2 446 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 MSCO60682 206 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 FECHP22830 423 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 CNGA1P29973 690 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 RGS2P41220 211 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 FOXO4P98177 505 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 TRIM26Q12899 539 aaPredicted RBP8.03□□□□□ -1.12
LINC00396-201ENST00000411690 AAK1Q2M2I8 961 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 MSS51Q4VC12 460 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 CAVIN4Q5BKX8 364 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 CDC42EP5Q6NZY7 148 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 SH3RF1Q7Z6J0 888 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 FBXO33Q7Z6M2 555 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 CCDC84Q86UT8 332 aaPredicted RBP8.03□□□□□ -1.12
LINC00396-201ENST00000411690 CCAR1Q8IX12 1150 aaKnown RBP8.03□□□□□ -1.12
LINC00396-201ENST00000411690 TRIM43Q96BQ3 446 aaPredicted RBP8.03□□□□□ -1.12
LINC00396-201ENST00000411690 PDLIM7Q9NR12 457 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 CXXC1Q9P0U4 656 aaPredicted RBP8.03□□□□□ -1.12
LINC00396-201ENST00000411690 MORF4L1Q9UBU8 362 aa8.03□□□□□ -1.12
LINC00396-201ENST00000411690 SALL2Q9Y467 1007 aaPredicted RBP8.03□□□□□ -1.12
LINC00396-201ENST00000411690 LAMA2P24043 3122 aaKnown RBP8.02□□□□□ -1.13
LINC00396-201ENST00000411690 MAPK4P31152 587 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 EPHB4P54760 987 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 SPP2Q13103 211 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 ADGRE1Q14246 886 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 TRIM60Q495X7 471 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 GJC2Q5T442 439 aaPredicted RBP8.02□□□□□ -1.13
LINC00396-201ENST00000411690 MFSD14CQ5VZR4 134 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 CCDC129Q6ZRS4 1044 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 ZFPM1Q8IX07 1006 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 CCDC146Q8IYE0 955 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 ZSCAN1Q8NBB4 408 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 ARRDC4Q8NCT1 418 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 GPRC5AQ8NFJ5 357 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 USP6NLQ92738 828 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 USP40Q9NVE5 1235 aa8.02□□□□□ -1.13
LINC00396-201ENST00000411690 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.02□□□□□ -1.13
LINC00396-201ENST00000411690 PTPRFP10586 1907 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 ATRNL1Q5VV63 1379 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 TCF20Q9UGU0 1960 aaKnown RBP8.01□□□□□ -1.13
LINC00396-201ENST00000411690 FAM86C2PA6NEL3 165 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 KBTBD13C9JR72 458 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 ZNF853P0CG23 659 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 RAG1P15918 1043 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 ITGB8P26012 769 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 GCGRP47871 477 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 HMGCS2P54868 508 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 IRX3P78415 501 aaPredicted RBP8.01□□□□□ -1.13
LINC00396-201ENST00000411690 MAP3K10Q02779 954 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 TFF2Q03403 129 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 LMBR1LQ6UX01 489 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 GPR142Q7Z601 462 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
LINC00396-201ENST00000411690 C8orf58Q8NAV2 365 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 APBA2Q99767 749 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 STK31Q9BXU1 1019 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 PCGF6Q9BYE7 350 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 C11orf16Q9NQ32 467 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 NXF1Q9UBU9 619 aaKnown RBP8.01□□□□□ -1.13
LINC00396-201ENST00000411690 DAXXQ9UER7 740 aaPredicted RBP8.01□□□□□ -1.13
LINC00396-201ENST00000411690 DAGLAQ9Y4D2 1042 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 TACC3Q9Y6A5 838 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 CDH23Q9H251 3354 aa8.01□□□□□ -1.13
LINC00396-201ENST00000411690 FAM181BA6NEQ2 426 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 SMIM22K7EJ46 135 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 PEX10O60683 326 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 SLURP2P0DP57 97 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 ZEB1P37275 1124 aaPredicted RBP8□□□□□ -1.13
LINC00396-201ENST00000411690 KCNQ1P51787 676 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 FPGSQ05932 587 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 SNX17Q15036 470 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 PLEKHH3Q7Z736 793 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 ZNF280CQ8ND82 737 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 LINS1Q8NG48 757 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 RUNDC1Q96C34 613 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 EDC3Q96F86 508 aaKnown RBP8□□□□□ -1.13
LINC00396-201ENST00000411690 PBX4Q9BYU1 374 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 CWC22Q9HCG8 908 aaKnown RBP8□□□□□ -1.13
LINC00396-201ENST00000411690 TXNRD2Q9NNW7 524 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 FRMPD3Q5JV73 1810 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 UTYO14607 1347 aa8□□□□□ -1.13
LINC00396-201ENST00000411690 MYBBP1AQ9BQG0 1328 aaKnown RBP8□□□□□ -1.13
LINC00396-201ENST00000411690 PHIPQ8WWQ0 1821 aa7.99□□□□□ -1.13
LINC00396-201ENST00000411690 ENTPD3O75355 529 aa7.99□□□□□ -1.13
LINC00396-201ENST00000411690 CLTBP09497 229 aa7.99□□□□□ -1.13
LINC00396-201ENST00000411690 RGS3P49796 1198 aa7.99□□□□□ -1.13
LINC00396-201ENST00000411690 GNAI1P63096 354 aa7.99□□□□□ -1.13
LINC00396-201ENST00000411690 SKOR1P84550 965 aa7.99□□□□□ -1.13
LINC00396-201ENST00000411690 ATP2B2Q01814 1243 aa7.99□□□□□ -1.13
LINC00396-201ENST00000411690 TLE2Q04725 743 aa7.99□□□□□ -1.13
LINC00396-201ENST00000411690 MAP2K5Q13163 448 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms