RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 NBPF3Q9H094 633 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 VCPKMTQ9H867 229 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 CENPFP49454 3210 aa19.38■□□□□ 0.69
NOD1-202ENST00000411552 ORC4O43929 436 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 FGRP09769 529 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 PSMC4P43686 418 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 TFAP4Q01664 338 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 FAM110CQ1W6H9 321 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 CATSPERGQ6ZRH7 1159 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 SPICE1Q8N0Z3 855 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 RUFY2Q8WXA3 655 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 LPAR1Q92633 364 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 CEP95Q96GE4 821 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 NYAP2Q9P242 653 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 PTPN22Q9Y2R2 807 aa19.37■□□□□ 0.69
NOD1-202ENST00000411552 BMP2KLQ5H9B9 411 aa19.36■□□□□ 0.69
NOD1-202ENST00000411552 ERICH6BQ5W0A0 696 aa19.36■□□□□ 0.69
NOD1-202ENST00000411552 POTEEQ6S8J3 1075 aa19.36■□□□□ 0.69
NOD1-202ENST00000411552 TBC1D10CQ8IV04 446 aa19.36■□□□□ 0.69
NOD1-202ENST00000411552 GOPCQ9HD26 462 aa19.36■□□□□ 0.69
NOD1-202ENST00000411552 MTMR4Q9NYA4 1195 aa19.36■□□□□ 0.69
NOD1-202ENST00000411552 RANBP6O60518 1105 aaKnown RBP19.35■□□□□ 0.69
NOD1-202ENST00000411552 PEX10O60683 326 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 FMNL1O95466 1100 aaPredicted RBP19.35■□□□□ 0.69
NOD1-202ENST00000411552 GNRH1P01148 92 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 TANGO6Q9C0B7 1094 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 TXNRD2Q9NNW7 524 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 TOMM22Q9NS69 142 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 PPP4R2Q9NY27 417 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 CLIP2Q9UDT6 1046 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 HPS5Q9UPZ3 1129 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 RLFQ13129 1914 aa19.35■□□□□ 0.69
NOD1-202ENST00000411552 DOCK3Q8IZD9 2030 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 TSPY2A6NKD2 308 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 ZNF213O14771 459 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 SGSM2O43147 1006 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 TTLL1O95922 423 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 FCGRTP55899 365 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 AKNAD1Q5T1N1 836 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 GTF3C2Q8WUA4 911 aaPredicted RBP19.34■□□□□ 0.69
NOD1-202ENST00000411552 STAG1Q8WVM7 1258 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 RBPJLQ9UBG7 517 aa19.34■□□□□ 0.69
NOD1-202ENST00000411552 PARP14Q460N5 1801 aa19.33■□□□□ 0.69
NOD1-202ENST00000411552 WDR46O15213 610 aaKnown RBP19.33■□□□□ 0.68
NOD1-202ENST00000411552 RAD21O60216 631 aa19.33■□□□□ 0.68
NOD1-202ENST00000411552 NMT2O60551 498 aa19.33■□□□□ 0.68
NOD1-202ENST00000411552 PCP11498 1178 aaKnown RBP19.33■□□□□ 0.68
NOD1-202ENST00000411552 RRP12Q5JTH9 1297 aaKnown RBP19.33■□□□□ 0.68
NOD1-202ENST00000411552 MFSD6Q6ZSS7 791 aa19.33■□□□□ 0.68
NOD1-202ENST00000411552 MKL1Q969V6 931 aa19.33■□□□□ 0.68
NOD1-202ENST00000411552 PAGR1Q9BTK6 254 aa19.33■□□□□ 0.68
NOD1-202ENST00000411552 IL17RBQ9NRM6 502 aa19.33■□□□□ 0.68
NOD1-202ENST00000411552 CTNNA3Q9UI47 895 aa19.33■□□□□ 0.68
NOD1-202ENST00000411552 NEDD4P46934 1319 aa19.32■□□□□ 0.68
NOD1-202ENST00000411552 SPDYE16A6NNV3 312 aaPredicted RBP19.32■□□□□ 0.68
NOD1-202ENST00000411552 PTH1RQ03431 593 aa19.32■□□□□ 0.68
NOD1-202ENST00000411552 COG2Q14746 738 aa19.32■□□□□ 0.68
NOD1-202ENST00000411552 IMMTQ16891 758 aaKnown RBP19.32■□□□□ 0.68
NOD1-202ENST00000411552 LBX2Q6XYB7 198 aa19.32■□□□□ 0.68
NOD1-202ENST00000411552 GPRC5AQ8NFJ5 357 aa19.32■□□□□ 0.68
NOD1-202ENST00000411552 RNF41Q9H4P4 317 aaPredicted RBP19.32■□□□□ 0.68
NOD1-202ENST00000411552 SRRDQ9UH36 339 aa19.32■□□□□ 0.68
NOD1-202ENST00000411552 PTCH2Q9Y6C5 1203 aa19.32■□□□□ 0.68
NOD1-202ENST00000411552 F5H6K3 240 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 TNPO2O14787 897 aaKnown RBP19.31■□□□□ 0.68
NOD1-202ENST00000411552 CNMDO75829 334 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 FLOT1O75955 427 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 NDUFB10O96000 172 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 HOXD10P28358 340 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 ERVK-9P63128 1117 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 ERVK-24P63145 666 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 KLRC3Q07444 240 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 FAM83BQ5T0W9 1011 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 LRRC47Q8N1G4 583 aaKnown RBP19.31■□□□□ 0.68
NOD1-202ENST00000411552 NKX2-3Q8TAU0 364 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 SYNPO2Q9UMS6 1093 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 RABGAP1Q9Y3P9 1069 aa19.31■□□□□ 0.68
NOD1-202ENST00000411552 CCDC85CA6NKD9 419 aa19.3■□□□□ 0.68
NOD1-202ENST00000411552 PRMT2P55345 433 aa19.3■□□□□ 0.68
NOD1-202ENST00000411552 Q3C1V9 767 aa19.3■□□□□ 0.68
NOD1-202ENST00000411552 PPP4R3BQ5MIZ7 849 aa19.3■□□□□ 0.68
NOD1-202ENST00000411552 NUP88Q99567 741 aaPredicted RBP19.3■□□□□ 0.68
NOD1-202ENST00000411552 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
NOD1-202ENST00000411552 BTBD7Q9P203 1132 aa19.3■□□□□ 0.68
NOD1-202ENST00000411552 STX8Q9UNK0 236 aa19.3■□□□□ 0.68
NOD1-202ENST00000411552 A0A0G2JMZ2 1700 aa19.3■□□□□ 0.68
NOD1-202ENST00000411552 MYPNQ86TC9 1320 aa19.29■□□□□ 0.68
NOD1-202ENST00000411552 DSG3P32926 999 aa19.29■□□□□ 0.68
NOD1-202ENST00000411552 PRKCZQ05513 592 aa19.29■□□□□ 0.68
NOD1-202ENST00000411552 GMCL1P1Q8NEA9 526 aa19.29■□□□□ 0.68
NOD1-202ENST00000411552 ESYT1Q9BSJ8 1104 aa19.29■□□□□ 0.68
NOD1-202ENST00000411552 FBXO28Q9NVF7 368 aa19.29■□□□□ 0.68
NOD1-202ENST00000411552 GABRQQ9UN88 632 aa19.29■□□□□ 0.68
NOD1-202ENST00000411552 NOVP48745 357 aa19.28■□□□□ 0.68
NOD1-202ENST00000411552 SAMD1Q6SPF0 538 aaPredicted RBP19.28■□□□□ 0.68
NOD1-202ENST00000411552 ESR2Q92731 530 aa19.28■□□□□ 0.68
NOD1-202ENST00000411552 COA7Q96BR5 231 aa19.28■□□□□ 0.68
NOD1-202ENST00000411552 ATG4CQ96DT6 458 aa19.28■□□□□ 0.68
NOD1-202ENST00000411552 PORCNQ9H237 461 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms