RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 MROH6A6NGR9 719 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 MMP20O60882 483 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 FOXO4P98177 505 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 CHRNEQ04844 493 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 USP4Q13107 963 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 NELL1Q92832 810 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 PHACTR1Q9C0D0 580 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 RASSF4Q9H2L5 321 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 SCHIP1Q9P0W5 487 aaPredicted RBP0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 ZNF70Q9UC06 446 aaPredicted RBP0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 PACSIN3Q9UKS6 424 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 TENM1Q9UKZ4 2725 aa0.09□□□□□ -2.4
RNU4-88P-201ENST00000411220 IGKV2D-30A0A075B6S6 120 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 KIAA0355O15063 1070 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 ESR1P03372 595 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 CCT4P50991 539 aaKnown RBP0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 MCCD1P59942 119 aaPredicted RBP0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 TMEM62Q0P6H9 643 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 DIXDC1Q155Q3 683 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 DHX38Q92620 1227 aaKnown RBP0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 UBE2FQ969M7 185 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 KREMEN1Q96MU8 473 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 PIDD1Q9HB75 910 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 RAD18Q9NS91 495 aa0.08□□□□□ -2.4
RNU4-88P-201ENST00000411220 C1RP00736 705 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 SDHBP21912 280 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 NR4A1P22736 598 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 CTDSPL2Q05D32 466 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 QPCTQ16769 361 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 HP1BP3Q5SSJ5 553 aaPredicted RBP0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 NLRX1Q86UT6 975 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 SMYD4Q8IYR2 804 aaPredicted RBP0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 SAMD14Q8IZD0 417 aaPredicted RBP0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 ZNF513Q8N8E2 541 aaPredicted RBP0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 IL17DQ8TAD2 202 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 ZCCHC14Q8WYQ9 949 aaKnown RBP0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 ZNF592Q92610 1267 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 TAF15Q92804 592 aaKnown RBP eCLIP0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 FCRL4Q96PJ5 515 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 PBX4Q9BYU1 374 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 SYNPO2LQ9H987 977 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 RSAD1Q9HA92 442 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 CORINQ9Y5Q5 1042 aa0.07□□□□□ -2.4
RNU4-88P-201ENST00000411220 PRSS44E7EML9 344 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 INSIG1O15503 277 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 SNHG28P0DPA3 235 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 EPHB4P54760 987 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 TARBP2Q15633 366 aaKnown RBP0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 MBNL2Q5VZF2 373 aaKnown RBP0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 FBXO42Q6P3S6 717 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 TTLL7Q6ZT98 887 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 ERICH6Q7L0X2 663 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 ADAMTS19Q8TE59 1207 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 POP1Q99575 1024 aaKnown RBP0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 TBC1D2Q9BYX2 928 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 CRTAC1Q9NQ79 661 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 JADE2Q9NQC1 790 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 WDR70Q9NW82 654 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 KLHL14Q9P2G3 628 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 HCN4Q9Y3Q4 1203 aa0.06□□□□□ -2.4
RNU4-88P-201ENST00000411220 ANKRD17O75179 2603 aaKnown RBP0.05□□□□□ -2.4
RNU4-88P-201ENST00000411220 SOX1O00570 391 aaPredicted RBP0.05□□□□□ -2.4
RNU4-88P-201ENST00000411220 CLK3P49761 638 aaKnown RBP0.05□□□□□ -2.4
RNU4-88P-201ENST00000411220 Q7L0L9 218 aa0.05□□□□□ -2.4
RNU4-88P-201ENST00000411220 CCDC85AQ96PX6 553 aaPredicted RBP0.05□□□□□ -2.4
RNU4-88P-201ENST00000411220 SOX17Q9H6I2 414 aaPredicted RBP0.05□□□□□ -2.4
RNU4-88P-201ENST00000411220 ZSWIM5Q9P217 1185 aa0.05□□□□□ -2.4
RNU4-88P-201ENST00000411220 ST14Q9Y5Y6 855 aa0.05□□□□□ -2.4
RNU4-88P-201ENST00000411220 TMEM229AB2RXF0 380 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 TGFBR3LH3BV60 316 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 B4GALT3O60512 393 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 EIF4EBP3O60516 100 aaPredicted RBP0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 MPOP05164 745 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 CELA3AP09093 270 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 INPP5BP32019 993 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 BMP8BP34820 402 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 HIRAP54198 1017 aaPredicted RBP0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 HYAL2Q12891 473 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 IKBKEQ14164 716 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 FAM26FQ5R3K3 315 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 SLFN13Q68D06 897 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 OLFML1Q6UWY5 402 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 MEPCEQ7L2J0 689 aaKnown RBP0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 ZDHHC17Q8IUH5 632 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 MFSD4AQ8N468 514 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 ANKS4BQ8N8V4 417 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 SPATA5L1Q9BVQ7 753 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 PRDM5Q9NQX1 630 aaPredicted RBP0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 DMGDHQ9UI17 866 aaKnown RBP0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 PROCRQ9UNN8 238 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 MAPK8IP1Q9UQF2 711 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 FAN1Q9Y2M0 1017 aa0.04□□□□□ -2.4
RNU4-88P-201ENST00000411220 ZBBXA8MT70 800 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 ERVFRD-1P60508 538 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 RNF111Q6ZNA4 994 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 SLC9A9Q8IVB4 645 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 SIRT1Q96EB6 747 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 GGNBP2Q9H3C7 697 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 PRDM13Q9H4Q3 707 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 SLAIN2Q9P270 581 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms