RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 ZSCAN31Q96LW9 406 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 SENP2Q9HC62 589 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 MTMR7Q9Y216 660 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 TMX2Q9Y320 296 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 OTOFQ9HC10 1997 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 TRIM75PA6NK02 468 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 GOLGA8BA8MQT2 603 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 ECE1P42892 770 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 RCAN1P53805 252 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 BECN1Q14457 450 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 ZYXQ15942 572 aaKnown RBP11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 APOA5Q6Q788 366 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 USP17L2Q6R6M4 530 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 SAPCD2Q86UD0 394 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 SIAH1Q8IUQ4 282 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 GMCL1P1Q8NEA9 526 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 ACER1Q8TDN7 264 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 NUP133Q8WUM0 1156 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 SNX21Q969T3 373 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 CHMP4CQ96CF2 233 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 OPTNQ96CV9 577 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 ZNF274Q96GC6 653 aaPredicted RBP11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 KIAA1683Q9H0B3 1180 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 TMOD4Q9NZQ9 345 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 BRPF3Q9ULD4 1205 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 TPCN1Q9ULQ1 816 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 AFG3L2Q9Y4W6 797 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 TLL2Q9Y6L7 1015 aa11.8□□□□□ -0.52
RN7SKP54-201ENST00000410704 A0A1W2PRG0 241 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 GOLGA8AA7E2F4 631 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 F5H6K3 240 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 CXCL11O14625 94 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 PDIA3P30101 505 aaKnown RBP11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 KIF5BP33176 963 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 METAP2P50579 478 aaKnown RBP eCLIP11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 APLP1P51693 650 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 ZNF157P51786 506 aaPredicted RBP11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 BACE1P56817 501 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 EVCP57679 992 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 KLRC3Q07444 240 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 MTMR2Q13614 643 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 SLFN13Q68D06 897 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 MICU3Q86XE3 530 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 CTCFLQ8NI51 663 aaPredicted RBP11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 LPAR1Q92633 364 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 WNK4Q96J92 1243 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 SH2B1Q9NRF2 756 aaPredicted RBP11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 ISY1Q9ULR0 285 aaKnown RBP11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 RBM19Q9Y4C8 960 aaKnown RBP11.79□□□□□ -0.52
RN7SKP54-201ENST00000410704 CCDC196A0A1B0GTZ2 297 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 K7ELQ4 463 aaPredicted RBP11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 DHX16O60231 1041 aaKnown RBP11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 CD2BP2O95400 341 aaKnown RBP11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 NDUFB10O96000 172 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 SLC1A4P43007 532 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 GNAQP50148 359 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 STK3Q13188 491 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 RTN1Q16799 776 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 ASPRV1Q53RT3 343 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 RGMBQ6NW40 437 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 FANCBQ8NB91 859 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 DCAF4Q8WV16 495 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 GMCL1Q96IK5 515 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 HHIPL1Q96JK4 782 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 MYL10Q9BUA6 226 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
RN7SKP54-201ENST00000410704 IRF6O14896 467 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 WDR46O15213 610 aaKnown RBP11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 PFKFB2O60825 505 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 ZBTB48P10074 688 aaPredicted RBP11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 PDHBP11177 359 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 RXRAP19793 462 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 GTF2A2P52657 109 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 HMGCS2P54868 508 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 TROAPQ12815 778 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 GRM4Q14833 912 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 ME3Q16798 604 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 GPATCH4Q5T3I0 446 aaKnown RBP11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 FASTKD5Q7L8L6 764 aaKnown RBP11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 RAB11FIP4Q86YS3 637 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 CCDC144CPQ8IYA2 1237 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 SPICE1Q8N0Z3 855 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 CCDC102AQ96A19 550 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 TMX3Q96JJ7 454 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 RBM28Q9NW13 759 aaKnown RBP11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms