RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 SH3TC1Q8TE82 1336 aa5.88□□□□□ -1.47
RNU4-25P-201ENST00000410569 FAM196BA6NMK8 535 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L15C9J2P7 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L10C9JJH3 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L13C9JLJ4 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L12C9JPN9 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L11C9JVI0 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L21D6R901 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L18D6R9N7 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L22D6RA61 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L17D6RBQ6 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L19D6RCP7 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L20D6RJB6 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 EIF2S2P20042 333 aaKnown RBP5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 USP17L24Q0WX57 530 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 DPYDQ12882 1025 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 AIMP1Q12904 312 aaKnown RBP5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 NFE2L2Q16236 605 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 PKN2Q16513 984 aaKnown RBP5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 HSP90AB3PQ58FF7 597 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 HABP4Q5JVS0 413 aaKnown RBP5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 GPAT2Q6NUI2 795 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 FBXO46Q6PJ61 603 aaPredicted RBP5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 COPS6Q7L5N1 327 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 TMC4Q7Z404 712 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 XAGE3Q8WTP9 111 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 C2orf49Q9BVC5 232 aaPredicted RBP5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 NEUROD4Q9HD90 331 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 TRMT112Q9UI30 125 aaKnown RBP5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 TSPYL4Q9UJ04 414 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 HDAC9Q9UKV0 1011 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 SSC5DA1L4H1 1573 aa5.87□□□□□ -1.47
RNU4-25P-201ENST00000410569 PITPNM2Q9BZ72 1349 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 UBE2Q2LH0YL09 131 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 ITGB2P05107 769 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 VIL1P09327 827 aaKnown RBP5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 AMPD1P23109 780 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 DGKGP49619 791 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 PCBP4P57723 403 aaKnown RBP5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 ZNF280AP59817 542 aaPredicted RBP5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 TCIRG1Q13488 830 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 KRT24Q2M2I5 525 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 PLA2G4EQ3MJ16 856 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 PRAMEF18Q5VWM3 479 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 CHSY3Q70JA7 882 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 ANKMY2Q8IV38 441 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 TBC1D16Q8TBP0 767 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 SCG3Q8WXD2 468 aaKnown RBP5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 GCC1Q96CN9 775 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 MDFIQ99750 246 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 R3HDMLQ9H3Y0 253 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 VRTNQ9H8Y1 702 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 ANKIB1Q9P2G1 1089 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 PRR12Q9ULL5 1215 aa5.86□□□□□ -1.47
RNU4-25P-201ENST00000410569 ARAP2Q8WZ64 1704 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 UFL1O94874 794 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 COL8A1P27658 744 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 FXR1P51114 621 aaKnown RBP eCLIP5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 FKBP1BP68106 108 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 SFSWAPQ12872 951 aaKnown RBP5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 GRIN2CQ14957 1233 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 SF3B3Q15393 1217 aaKnown RBP5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 NOM1Q5C9Z4 860 aaKnown RBP5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 ALYREFQ86V81 257 aaKnown RBP5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 ZNF280CQ8ND82 737 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 FAM89AQ96GI7 184 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 HSH2DQ96JZ2 352 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 SUSD3Q96L08 255 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 GMLQ99445 158 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 EYA3Q99504 573 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 ISCA1Q9BUE6 129 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 MYOZ2Q9NPC6 264 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 CHPF2Q9P2E5 772 aa5.85□□□□□ -1.47
RNU4-25P-201ENST00000410569 MAPK8IP3Q9UPT6 1336 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 GNB5O14775 395 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 FKTNO75072 461 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 SIN3BO75182 1162 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 IGFBP4P22692 258 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 TM4SF4P48230 202 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 TYRO3Q06418 890 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 NBPF9Q3BBW0 867 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 SYT9Q86SS6 491 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 AGBL3Q8NEM8 1001 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 PLBD2Q8NHP8 589 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 SLC30A3Q99726 388 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 BRD7Q9NPI1 651 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 SEC31BQ9NQW1 1179 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 PODXL2Q9NZ53 605 aa5.84□□□□□ -1.47
RNU4-25P-201ENST00000410569 COL1A1P02452 1464 aaPredicted RBP5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 ELOA3CA0A087WX78 387 aaPredicted RBP5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 KRBA1A5PL33 1030 aa5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 ELOA3DA6NLF2 546 aaPredicted RBP5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 PIK3R2O00459 728 aa5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 IRS4O14654 1257 aaPredicted RBP5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 SASH1O94885 1247 aa5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 NEFMP07197 916 aa5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 CAP1Q01518 475 aa5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 PTPN12Q05209 780 aaKnown RBP5.83□□□□□ -1.48
RNU4-25P-201ENST00000410569 SREBF2Q12772 1141 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms