RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 FANCLQ9NW38 375 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 ADD3Q9UEY8 706 aaKnown RBP3.59□□□□□ -1.84
CUL3-204ENST00000409777 MKRN1Q9UHC7 482 aaKnown RBP3.59□□□□□ -1.84
CUL3-204ENST00000409777 LCMT1Q9UIC8 334 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 LHX6Q9UPM6 363 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 SLIT2O94813 1529 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 TARSL2A2RTX5 802 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 RCCD1A6NED2 376 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 PRC1O43663 620 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 AP1G2O75843 785 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 FMNL1O95466 1100 aaPredicted RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 GCP02774 474 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 CSF1RP07333 972 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 IVLP07476 585 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 SNRPA1P09661 255 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 TOP1P11387 765 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 DNAJB2P25686 324 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 LIFRP42702 1097 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 CORO7P57737 925 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 CCT2P78371 535 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 SEMA3FQ13275 785 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 PNOCQ13519 176 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 SF3A1Q15459 793 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 C1orf141Q5JVX7 400 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 PRPF38BQ5VTL8 546 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 RAD9BQ6WBX8 426 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 DDX46Q7L014 1031 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 COPS6Q7L5N1 327 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 VPS37DQ86XT2 251 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 SUGP1Q8IWZ8 645 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 THEMISQ8N1K5 641 aaPredicted RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 CEP112Q8N8E3 955 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 VGLL2Q8N8G2 317 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 JMYQ8N9B5 988 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 FAM71BQ8TC56 605 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 APPBP2Q92624 585 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 MYD88Q99836 296 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 PAGR1Q9BTK6 254 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 ISCA1Q9BUE6 129 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 SIL1Q9H173 461 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 MED4Q9NPJ6 270 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 RAI14Q9P0K7 980 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 LIMA1Q9UHB6 759 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 TSKSQ9UJT2 592 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 NAP1L2Q9ULW6 460 aaPredicted RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 AXIN2Q9Y2T1 843 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 PCDHA5Q9Y5H7 936 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 DDX60LQ5H9U9 1706 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 A0A0U1RQG5 324 aaPredicted RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 NBPF26B4DH59 902 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 PSMD14O00487 310 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 MFAP3LO75121 409 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 FGAP02671 866 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 USP17L8P0C7I0 530 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 MAGEA9P43362 315 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 CEBPZQ03701 1054 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 ITIH3Q06033 890 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 PDE4CQ08493 712 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 GPS2Q13227 327 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 SWT1Q5T5J6 900 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 NBPF14Q5TI25 921 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 KRT40Q6A162 431 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 TTLL5Q6EMB2 1281 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 NBPF10Q6P3W6 841 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 RSBN1LQ6PCB5 846 aaPredicted RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 HDXQ7Z353 690 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 UBE3BQ7Z3V4 1068 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 SULF1Q8IWU6 871 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 NBPF15Q8N660 670 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 MNS1Q8NEH6 495 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 NCOA7Q8NI08 942 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 TNFRSF25Q93038 417 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 ZNF496Q96IT1 587 aaPredicted RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 TMEM87BQ96K49 555 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 PURBQ96QR8 312 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 RASSF4Q9H2L5 321 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 FOXP1Q9H334 677 aaPredicted RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 TMEM134Q9H6X4 195 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 LY9Q9HBG7 655 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 BRMS1Q9HCU9 246 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 SEC31BQ9NQW1 1179 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 KCNH3Q9ULD8 1083 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 GNEQ9Y223 722 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 RRP15Q9Y3B9 282 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 SRPRBQ9Y5M8 271 aaKnown RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 CDHR2Q9BYE9 1310 aa3.58□□□□□ -1.84
CUL3-204ENST00000409777 COL1A1P02452 1464 aaPredicted RBP3.58□□□□□ -1.84
CUL3-204ENST00000409777 KLF18A0A0U1RQI7 1052 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 GOLIM4O00461 696 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 LILRB3O75022 631 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 CDKL5O76039 1030 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 URI1O94763 535 aaPredicted RBP3.57□□□□□ -1.84
CUL3-204ENST00000409777 SYF2O95926 243 aaKnown RBP3.57□□□□□ -1.84
CUL3-204ENST00000409777 MMP1P03956 469 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 CCDC175P0C221 793 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 IFNAR1P17181 557 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 SERPINB4P48594 390 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 CHMP4BP1P59074 171 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 POSTNQ15063 836 aa3.57□□□□□ -1.84
CUL3-204ENST00000409777 IMMTQ16891 758 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms