RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ECM2O94769 699 aaPredicted RBP36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 FGRP09769 529 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 TSPY3P0CV98 308 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 TSPY8P0CW00 308 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 ARHGEF6Q15052 776 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 FBXO46Q6PJ61 603 aaPredicted RBP36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 CATSPERGQ6ZRH7 1159 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 NEDD1Q8NHV4 660 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 LPAR1Q92633 364 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 NBPF3Q9H094 633 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 NYAP2Q9P242 653 aa36.98■■■■□ 3.51
TRAF3IP1-203ENST00000409739 ORC4O43929 436 aa36.97■■■■□ 3.51
TRAF3IP1-203ENST00000409739 TFAP4Q01664 338 aa36.97■■■■□ 3.51
TRAF3IP1-203ENST00000409739 CEP95Q96GE4 821 aa36.97■■■■□ 3.51
TRAF3IP1-203ENST00000409739 COL11A1P12107 1806 aaPredicted RBP36.96■■■■□ 3.51
TRAF3IP1-203ENST00000409739 PSMC4P43686 418 aa36.96■■■■□ 3.51
TRAF3IP1-203ENST00000409739 BMP2KLQ5H9B9 411 aa36.96■■■■□ 3.51
TRAF3IP1-203ENST00000409739 TRIM47Q96LD4 638 aa36.96■■■■□ 3.51
TRAF3IP1-203ENST00000409739 TBC1D10CQ8IV04 446 aa36.95■■■■□ 3.51
TRAF3IP1-203ENST00000409739 SPICE1Q8N0Z3 855 aa36.95■■■■□ 3.51
TRAF3IP1-203ENST00000409739 PPP4R2Q9NY27 417 aa36.95■■■■□ 3.51
TRAF3IP1-203ENST00000409739 MTMR4Q9NYA4 1195 aa36.95■■■■□ 3.51
TRAF3IP1-203ENST00000409739 GOPCQ9HD26 462 aa36.94■■■■□ 3.5
TRAF3IP1-203ENST00000409739 MORF4L1Q9UBU8 362 aa36.94■■■■□ 3.5
TRAF3IP1-203ENST00000409739 PTPN22Q9Y2R2 807 aa36.94■■■■□ 3.5
TRAF3IP1-203ENST00000409739 TSPY2A6NKD2 308 aa36.93■■■■□ 3.5
TRAF3IP1-203ENST00000409739 SGSM2O43147 1006 aa36.93■■■■□ 3.5
TRAF3IP1-203ENST00000409739 GTF3C2Q8WUA4 911 aaPredicted RBP36.93■■■■□ 3.5
TRAF3IP1-203ENST00000409739 WDR46O15213 610 aaKnown RBP36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 RANBP6O60518 1105 aaKnown RBP36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 GNRH1P01148 92 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 FCGRTP55899 365 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 AKNAD1Q5T1N1 836 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 POTEEQ6S8J3 1075 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 STAG1Q8WVM7 1258 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 TANGO6Q9C0B7 1094 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 TXNRD2Q9NNW7 524 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 TOMM22Q9NS69 142 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 HPS5Q9UPZ3 1129 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 CENPFP49454 3210 aa36.92■■■■□ 3.5
TRAF3IP1-203ENST00000409739 PEX10O60683 326 aa36.91■■■■□ 3.5
TRAF3IP1-203ENST00000409739 TTLL1O95922 423 aa36.91■■■■□ 3.5
TRAF3IP1-203ENST00000409739 RRP12Q5JTH9 1297 aaKnown RBP36.91■■■■□ 3.5
TRAF3IP1-203ENST00000409739 CLIP2Q9UDT6 1046 aa36.91■■■■□ 3.5
TRAF3IP1-203ENST00000409739 PLXNB2O15031 1838 aa36.9■■■■□ 3.5
TRAF3IP1-203ENST00000409739 ZNF213O14771 459 aa36.9■■■■□ 3.5
TRAF3IP1-203ENST00000409739 FMNL1O95466 1100 aaPredicted RBP36.9■■■■□ 3.5
TRAF3IP1-203ENST00000409739 PCP11498 1178 aaKnown RBP36.9■■■■□ 3.5
TRAF3IP1-203ENST00000409739 RBPJLQ9UBG7 517 aa36.9■■■■□ 3.5
TRAF3IP1-203ENST00000409739 CTNNA3Q9UI47 895 aa36.9■■■■□ 3.5
TRAF3IP1-203ENST00000409739 SPDYE16A6NNV3 312 aaPredicted RBP36.89■■■■□ 3.5
TRAF3IP1-203ENST00000409739 LBX2Q6XYB7 198 aa36.89■■■■□ 3.5
TRAF3IP1-203ENST00000409739 MFSD6Q6ZSS7 791 aa36.89■■■■□ 3.5
TRAF3IP1-203ENST00000409739 MKL1Q969V6 931 aa36.89■■■■□ 3.5
TRAF3IP1-203ENST00000409739 IL17RBQ9NRM6 502 aa36.89■■■■□ 3.5
TRAF3IP1-203ENST00000409739 NEDD4P46934 1319 aa36.88■■■■□ 3.49
TRAF3IP1-203ENST00000409739 PTH1RQ03431 593 aa36.88■■■■□ 3.49
TRAF3IP1-203ENST00000409739 PAGR1Q9BTK6 254 aa36.88■■■■□ 3.49
TRAF3IP1-203ENST00000409739 RNF41Q9H4P4 317 aaPredicted RBP36.88■■■■□ 3.49
TRAF3IP1-203ENST00000409739 RAD21O60216 631 aa36.87■■■■□ 3.49
TRAF3IP1-203ENST00000409739 NMT2O60551 498 aa36.87■■■■□ 3.49
TRAF3IP1-203ENST00000409739 IMMTQ16891 758 aaKnown RBP36.87■■■■□ 3.49
TRAF3IP1-203ENST00000409739 LRRC47Q8N1G4 583 aaKnown RBP36.87■■■■□ 3.49
TRAF3IP1-203ENST00000409739 SRRDQ9UH36 339 aa36.87■■■■□ 3.49
TRAF3IP1-203ENST00000409739 SYNPO2Q9UMS6 1093 aa36.87■■■■□ 3.49
TRAF3IP1-203ENST00000409739 PTCH2Q9Y6C5 1203 aa36.87■■■■□ 3.49
TRAF3IP1-203ENST00000409739 CNMDO75829 334 aa36.86■■■■□ 3.49
TRAF3IP1-203ENST00000409739 NDUFB10O96000 172 aa36.86■■■■□ 3.49
TRAF3IP1-203ENST00000409739 ERVK-9P63128 1117 aa36.86■■■■□ 3.49
TRAF3IP1-203ENST00000409739 ERVK-24P63145 666 aa36.86■■■■□ 3.49
TRAF3IP1-203ENST00000409739 COG2Q14746 738 aa36.86■■■■□ 3.49
TRAF3IP1-203ENST00000409739 GPRC5AQ8NFJ5 357 aa36.86■■■■□ 3.49
TRAF3IP1-203ENST00000409739 RABGAP1Q9Y3P9 1069 aa36.86■■■■□ 3.49
TRAF3IP1-203ENST00000409739 MYPNQ86TC9 1320 aa36.85■■■■□ 3.49
TRAF3IP1-203ENST00000409739 F5H6K3 240 aa36.85■■■■□ 3.49
TRAF3IP1-203ENST00000409739 TNPO2O14787 897 aaKnown RBP36.85■■■■□ 3.49
TRAF3IP1-203ENST00000409739 CAPN15O75808 1086 aa36.85■■■■□ 3.49
TRAF3IP1-203ENST00000409739 PRMT2P55345 433 aa36.85■■■■□ 3.49
TRAF3IP1-203ENST00000409739 KLRC3Q07444 240 aa36.85■■■■□ 3.49
TRAF3IP1-203ENST00000409739 PPP4R3BQ5MIZ7 849 aa36.85■■■■□ 3.49
TRAF3IP1-203ENST00000409739 NKX2-3Q8TAU0 364 aa36.85■■■■□ 3.49
TRAF3IP1-203ENST00000409739 FLOT1O75955 427 aa36.84■■■■□ 3.49
TRAF3IP1-203ENST00000409739 HOXD10P28358 340 aa36.84■■■■□ 3.49
TRAF3IP1-203ENST00000409739 FAM83BQ5T0W9 1011 aa36.84■■■■□ 3.49
TRAF3IP1-203ENST00000409739 Q3C1V9 767 aa36.83■■■■□ 3.49
TRAF3IP1-203ENST00000409739 GMCL1P1Q8NEA9 526 aa36.83■■■■□ 3.49
TRAF3IP1-203ENST00000409739 NUP88Q99567 741 aaPredicted RBP36.83■■■■□ 3.49
TRAF3IP1-203ENST00000409739 ESYT1Q9BSJ8 1104 aa36.83■■■■□ 3.49
TRAF3IP1-203ENST00000409739 HOXC10Q9NYD6 342 aa36.83■■■■□ 3.49
TRAF3IP1-203ENST00000409739 STX8Q9UNK0 236 aa36.83■■■■□ 3.49
TRAF3IP1-203ENST00000409739 NOVP48745 357 aa36.82■■■■□ 3.48
TRAF3IP1-203ENST00000409739 PRKCZQ05513 592 aa36.82■■■■□ 3.48
TRAF3IP1-203ENST00000409739 BTBD7Q9P203 1132 aa36.82■■■■□ 3.48
TRAF3IP1-203ENST00000409739 CCDC85CA6NKD9 419 aa36.81■■■■□ 3.48
TRAF3IP1-203ENST00000409739 DSG3P32926 999 aa36.81■■■■□ 3.48
TRAF3IP1-203ENST00000409739 TCP11L1Q9NUJ3 509 aa36.81■■■■□ 3.48
TRAF3IP1-203ENST00000409739 FBXO28Q9NVF7 368 aa36.81■■■■□ 3.48
TRAF3IP1-203ENST00000409739 GABRQQ9UN88 632 aa36.81■■■■□ 3.48
TRAF3IP1-203ENST00000409739 ESR2Q92731 530 aa36.8■■■■□ 3.48
TRAF3IP1-203ENST00000409739 ATG4CQ96DT6 458 aa36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms