RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 EVX2Q03828 476 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 ANO6Q4KMQ2 910 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 SLC10A5Q5PT55 438 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 NSUN7Q8NE18 718 aaKnown RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 ZNF274Q96GC6 653 aaPredicted RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 BLZF1Q9H2G9 400 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 SH2B2O14492 632 aaPredicted RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 SLC10A4Q96EP9 437 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 KANSL2Q9H9L4 492 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 PEAK1Q9H792 1746 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 TECP42680 631 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 DNA2P51530 1060 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 FBXO11Q86XK2 927 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 CDC27P30260 824 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 USP8P40818 1118 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNX13-202ENST00000409604 CT47A1Q5JQC4 288 aaPredicted RBP12.94□□□□□ -0.34
SNX13-202ENST00000409604 STRIP1Q5VSL9 837 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 LEO1Q8WVC0 666 aaPredicted RBP12.94□□□□□ -0.34
SNX13-202ENST00000409604 CLIC4Q9Y696 253 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 LETM1O95202 739 aaPredicted RBP12.94□□□□□ -0.34
SNX13-202ENST00000409604 LRP10Q7Z4F1 713 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 BMP3P12645 472 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 RASGRP2Q7LDG7 609 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 KRI1Q8N9T8 703 aaKnown RBP12.94□□□□□ -0.34
SNX13-202ENST00000409604 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 BICD1Q96G01 975 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 PHLPP1O60346 1717 aa12.94□□□□□ -0.34
SNX13-202ENST00000409604 USP17L15C9J2P7 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L13C9JLJ4 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L11C9JVI0 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L18D6R9N7 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L22D6RA61 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L17D6RBQ6 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L19D6RCP7 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L20D6RJB6 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 CCT6AP40227 531 aaKnown RBP12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L24Q0WX57 530 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L6PQ6QN14 398 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 ANO10Q9NW15 660 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 FLT1P17948 1338 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 HMGCS2P54868 508 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 RSBN1LQ6PCB5 846 aaPredicted RBP12.93□□□□□ -0.34
SNX13-202ENST00000409604 ZKSCAN4Q969J2 545 aaPredicted RBP12.93□□□□□ -0.34
SNX13-202ENST00000409604 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
SNX13-202ENST00000409604 CERS3Q8IU89 383 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
SNX13-202ENST00000409604 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 DEFB129Q9H1M3 183 aa12.93□□□□□ -0.34
SNX13-202ENST00000409604 DDX19AQ9NUU7 478 aaKnown RBP12.93□□□□□ -0.34
SNX13-202ENST00000409604 USP17L10C9JJH3 530 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 TBCAO75347 108 aaKnown RBP12.92□□□□□ -0.34
SNX13-202ENST00000409604 KLHL40Q2TBA0 621 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 MAP1SQ66K74 1059 aaPredicted RBP12.92□□□□□ -0.34
SNX13-202ENST00000409604 IL27Q8NEV9 243 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 FBXO18Q8NFZ0 1043 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 ELP3Q9H9T3 547 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 KIF1AQ12756 1690 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 GUCY1A2P33402 732 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 MTIF2P46199 727 aaKnown RBP12.92□□□□□ -0.34
SNX13-202ENST00000409604 PPFIBP1Q86W92 1011 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 AOPEPQ8N6M6 819 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 TTC16Q8NEE8 873 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 TRIM47Q96LD4 638 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
SNX13-202ENST00000409604 F5H6K3 240 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
SNX13-202ENST00000409604 KLRC3Q07444 240 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 RILPL1Q5EBL4 403 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 LUZP1Q86V48 1076 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 SNX29Q8TEQ0 813 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
SNX13-202ENST00000409604 RAVER2Q9HCJ3 691 aaKnown RBP12.91□□□□□ -0.34
SNX13-202ENST00000409604 MYOZ2Q9NPC6 264 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 ZNF70Q9UC06 446 aaPredicted RBP12.91□□□□□ -0.34
SNX13-202ENST00000409604 LRWD1Q9UFC0 647 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 STYK1Q6J9G0 422 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 BRAPQ7Z569 592 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 ZFPM1Q8IX07 1006 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 DEF6Q9H4E7 631 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 EXOC1Q9NV70 894 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 TAL1P17542 331 aaPredicted RBP12.91□□□□□ -0.34
SNX13-202ENST00000409604 FGFR2P21802 821 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 TM4SF1P30408 202 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 COL9A3Q14050 684 aaPredicted RBP12.91□□□□□ -0.34
SNX13-202ENST00000409604 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 C12orf60Q5U649 245 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 WWC2Q6AWC2 1192 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 736.3 ms