RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 MRPS27Q92552 414 aaKnown RBP7.24□□□□□ -1.25
GTF3C3-202ENST00000409364 FBXW7Q969H0 707 aa7.24□□□□□ -1.25
GTF3C3-202ENST00000409364 TRIM44Q96DX7 344 aaPredicted RBP7.24□□□□□ -1.25
GTF3C3-202ENST00000409364 DYNLL2Q96FJ2 89 aa7.24□□□□□ -1.25
GTF3C3-202ENST00000409364 BRMS1Q9HCU9 246 aa7.24□□□□□ -1.25
GTF3C3-202ENST00000409364 TTF2Q9UNY4 1162 aaKnown RBP7.24□□□□□ -1.25
GTF3C3-202ENST00000409364 DAGLAQ9Y4D2 1042 aa7.24□□□□□ -1.25
GTF3C3-202ENST00000409364 CLIC4Q9Y696 253 aa7.24□□□□□ -1.25
GTF3C3-202ENST00000409364 LAMA4Q16363 1823 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 TIAM2Q8IVF5 1701 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 BTBD18B2RXH4 712 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 KINO60870 393 aaKnown RBP7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 RASA1P20936 1047 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 CMA1P23946 247 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 GUCY1A2P33402 732 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 SNW1Q13573 536 aaKnown RBP7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 CAMK4Q16566 473 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 SASS6Q6UVJ0 657 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 OLFM4Q6UX06 510 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 TMTC3Q6ZXV5 915 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 ILDR2Q71H61 639 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 DIS3L2Q8IYB7 885 aaKnown RBP7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 FSIP1Q8NA03 581 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 RNF214Q8ND24 703 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 PNMA1Q8ND90 353 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 ENGASEQ8NFI3 743 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 NEDD1Q8NHV4 660 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 C7orf43Q8WVR3 580 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 TEKT1Q969V4 418 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 LZTS2Q9BRK4 669 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 FUCA2Q9BTY2 467 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 FTOQ9C0B1 505 aaKnown RBP eCLIP7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 ANO8Q9HCE9 1232 aaPredicted RBP7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 IL17RBQ9NRM6 502 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 USP40Q9NVE5 1235 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 SAP30BPQ9UHR5 308 aaKnown RBP7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 CEP131Q9UPN4 1083 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 FLT1P17948 1338 aa7.23□□□□□ -1.25
GTF3C3-202ENST00000409364 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 NMT2O60551 498 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 PKN1Q16512 942 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 HS1BP3Q53T59 392 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 DEFB132Q7Z7B7 95 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 FAM177A1Q8N128 213 aaPredicted RBP7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 CMTR1Q8N1G2 835 aaKnown RBP7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 CERS5Q8N5B7 392 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 SRBD1Q8N5C6 995 aaKnown RBP7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 KHSRPQ92945 711 aaKnown RBP eCLIP7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 KCNJ14Q9UNX9 436 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 DUOX1Q9NRD9 1551 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 A0A1B0GUL6 1792 aa7.22□□□□□ -1.25
GTF3C3-202ENST00000409364 F8W031 263 aaPredicted RBP7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 CUTAO60888 179 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 PLEKHA8P1O95397 391 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 BMP15O95972 392 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 SMARCA1P28370 1054 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 CHRNA5P30532 468 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 TYRO3Q06418 890 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 PTPAQ15257 358 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 SLC4A8Q2Y0W8 1093 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 PPP4R3BQ5MIZ7 849 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 AXDND1Q5T1B0 1012 aaPredicted RBP7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 CKAP2LQ8IYA6 745 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 RTKN2Q8IZC4 609 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 FMR1NBQ8N0W7 255 aaPredicted RBP7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 TTLL6Q8N841 843 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 PDLIM2Q96JY6 352 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 ZDHHC15Q96MV8 337 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 SDF4Q9BRK5 362 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 PHF20Q9BVI0 1012 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 SH3GLB2Q9NR46 395 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 SWAP70Q9UH65 585 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 STX8Q9UNK0 236 aa7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 MORC2Q9Y6X9 1032 aaPredicted RBP7.21□□□□□ -1.25
GTF3C3-202ENST00000409364 UBE2Q2LH0YL09 131 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 ECE2O60344 883 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 HLA-DOAP06340 250 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 TOP1P11387 765 aaKnown RBP7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 SCG2P13521 617 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 CALML3P27482 149 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 MARCKSP29966 332 aaPredicted RBP7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 KRT2P35908 639 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 CRKP46108 304 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 NOVP48745 357 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 GABPAQ06546 454 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 KIAA2012Q0VF49 1180 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 GRM4Q14833 912 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 PFKFB3Q16875 520 aaPredicted RBP7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 DACT2Q5SW24 774 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 GALNT17Q6IS24 598 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 APOBEC3HQ6NTF7 200 aaKnown RBP7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 CDC42EP5Q6NZY7 148 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 CCDC125Q86Z20 511 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 FAM200AQ8TCP9 573 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 CCDC17Q96LX7 622 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 TIGD1Q96MW7 591 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 TMEM47Q9BQJ4 181 aa7.21□□□□□ -1.26
GTF3C3-202ENST00000409364 VPS33BQ9H267 617 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms