RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RGMBQ6NW40 437 aa16.54■□□□□ 0.24
CHRNA1-204ENST00000409323 RASAL3Q86YV0 1011 aa16.54■□□□□ 0.24
CHRNA1-204ENST00000409323 PNMA1Q8ND90 353 aa16.54■□□□□ 0.24
CHRNA1-204ENST00000409323 NUP133Q8WUM0 1156 aa16.54■□□□□ 0.24
CHRNA1-204ENST00000409323 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 CCDC69A6NI79 296 aa16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 USP17L10C9JJH3 530 aa16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 LARGE1O95461 756 aa16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 TOP1P11387 765 aaKnown RBP16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 MICU3Q86XE3 530 aa16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 DGKHQ86XP1 1220 aa16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 AS3MTQ9HBK9 375 aa16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 FRMPD2Q68DX3 1309 aaPredicted RBP16.53■□□□□ 0.24
CHRNA1-204ENST00000409323 PPATQ06203 517 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 SPRYD7Q5W111 196 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 ZNF654Q8IZM8 581 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 ZIC5Q96T25 663 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 WDR18Q9BV38 432 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 CREBZFQ9NS37 354 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 GINM1Q9NU53 330 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 TPCN1Q9ULQ1 816 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 TMX2Q9Y320 296 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 WDR19Q8NEZ3 1342 aa16.52■□□□□ 0.24
CHRNA1-204ENST00000409323 F5H6K3 240 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 NDUFB10O96000 172 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 GOLGA8HP0CJ92 632 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 NOVP48745 357 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 BACE1P56817 501 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 KLRC3Q07444 240 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 PPIL2Q13356 520 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 USP17L2Q6R6M4 530 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 GADL1Q6ZQY3 521 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 EMILIN3Q9NT22 766 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 SLC12A7Q9Y666 1083 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 GOLGA8BA8MQT2 603 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 LIFRP42702 1097 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 CCT2P78371 535 aaKnown RBP16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 APOA5Q6Q788 366 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 KCTD1Q719H9 257 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 ANKS1AQ92625 1134 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 AGXT2Q9BYV1 514 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 CPVLQ9H3G5 476 aa16.51■□□□□ 0.23
CHRNA1-204ENST00000409323 FAM155AB1AL88 458 aaPredicted RBP16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 ST18O60284 1047 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 SLC10A3P09131 477 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 DEFB115Q30KQ5 88 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 FAM83BQ5T0W9 1011 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 CMTR1Q8N1G2 835 aaKnown RBP16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 NECAB1Q8N987 351 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 MKL1Q969V6 931 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 KIAA1683Q9H0B3 1180 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 VCPKMTQ9H867 229 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 NCOA5Q9HCD5 579 aaKnown RBP16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 GPCPD1Q9NPB8 672 aa16.5■□□□□ 0.23
CHRNA1-204ENST00000409323 AOC2O75106 756 aa16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 PDHBP11177 359 aa16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 NT5C2P49902 561 aa16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 TREML2Q5T2D2 321 aa16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 TTBK2Q6IQ55 1244 aa16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 SGMS1Q86VZ5 419 aa16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 KCNH4Q9UQ05 1017 aa16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 BAZ2BQ9UIF8 2168 aaKnown RBP16.49■□□□□ 0.23
CHRNA1-204ENST00000409323 VCAM1P19320 739 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 TROAPQ12815 778 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 ME3Q16798 604 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 MS4A4AQ96JQ5 239 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 CAPNS2Q96L46 248 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 MTA3Q9BTC8 594 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 TMOD4Q9NZQ9 345 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
CHRNA1-204ENST00000409323 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 A0A0G2JLL6 359 aaPredicted RBP16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 UNCXA6NJT0 531 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 GOLGA8AA7E2F4 631 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 ZBTB43O43298 467 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 PDIA3P30101 505 aaKnown RBP16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 SLC16A2P36021 539 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 SLC1A4P43007 532 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 SNAPC2Q13487 334 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 CCL15Q16663 113 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 PPP4R3BQ5MIZ7 849 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 PRRT2Q7Z6L0 340 aaPredicted RBP16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 TMTC2Q8N394 836 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 CCDC82Q8N4S0 544 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 GMCL1P1Q8NEA9 526 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 PIBF1Q8WXW3 757 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 BRI3BPQ8WY22 251 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 RPAP3Q9H6T3 665 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms