RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 MRPL46Q9H2W6 279 aaKnown RBP13.34□□□□□ -0.27
SHANK2-203ENST00000409161 MAGEF1Q9HAY2 307 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 ABCC1P33527 1531 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 MGARPQ8TDB4 240 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 TTI1O43156 1089 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 IGSF3O75054 1194 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 PLEKHM2Q8IWE5 1019 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 HOMEZQ8IX15 550 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 CTAGE3PQ8IX95 158 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 KLHL7Q8IXQ5 586 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 VTI1AQ96AJ9 217 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 ACTR5Q9H9F9 607 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-203ENST00000409161 FGFR1OP2Q9NVK5 253 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 PEX19P40855 299 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 DMTNQ08495 405 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 OR8K1Q8NGG5 319 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 POLR3AO14802 1390 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-203ENST00000409161 CDC25BP30305 580 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 CD2APQ9Y5K6 639 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 DNM2P50570 870 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 NXNQ6DKJ4 435 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 TTC6Q86TZ1 520 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 SLC17A8Q8NDX2 589 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
SHANK2-203ENST00000409161 GOLGA4Q13439 2230 aaKnown RBP13.33□□□□□ -0.27
SHANK2-203ENST00000409161 DIXDC1Q155Q3 683 aa13.33□□□□□ -0.27
SHANK2-203ENST00000409161 KRT81Q14533 505 aa13.33□□□□□ -0.27
SHANK2-203ENST00000409161 LETM2Q2VYF4 491 aa13.33□□□□□ -0.27
SHANK2-203ENST00000409161 RAB20Q9NX57 234 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 PCDHB15Q9Y5E8 787 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 TTC38Q5R3I4 469 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 KLHDC4Q8TBB5 520 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 HOOK2Q96ED9 719 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 SERPINI1Q99574 410 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 ANGPTL3Q9Y5C1 460 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 RSBN1LQ6PCB5 846 aaPredicted RBP13.33□□□□□ -0.28
SHANK2-203ENST00000409161 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 NACA2Q9H009 215 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 RNASE9P60153 205 aaKnown RBP13.33□□□□□ -0.28
SHANK2-203ENST00000409161 CEP85Q6P2H3 762 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 NME9Q86XW9 330 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 MRPL50Q8N5N7 158 aaKnown RBP13.33□□□□□ -0.28
SHANK2-203ENST00000409161 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 GCNT3O95395 438 aa13.33□□□□□ -0.28
SHANK2-203ENST00000409161 KPNA2P52292 529 aaKnown RBP13.33□□□□□ -0.28
SHANK2-203ENST00000409161 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
SHANK2-203ENST00000409161 SYF2O95926 243 aaKnown RBP13.32□□□□□ -0.28
SHANK2-203ENST00000409161 ADCY8P40145 1251 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 SRRM1Q8IYB3 904 aaKnown RBP13.32□□□□□ -0.28
SHANK2-203ENST00000409161 TRIM15Q9C019 465 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 DENND2AQ9ULE3 1009 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 STAM2O75886 525 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 HAUS4Q9H6D7 363 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 MAST3O60307 1309 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 MTX1Q13505 466 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 PPP2R5DQ14738 602 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 FAM81BQ96LP2 452 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 KIAA0586Q9BVV6 1533 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 MAP3K7O43318 606 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 HADHQ16836 314 aaKnown RBP13.32□□□□□ -0.28
SHANK2-203ENST00000409161 NONOQ15233 471 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHANK2-203ENST00000409161 TCEANC2Q96MN5 208 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 MAP3K5Q99683 1374 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 TRIM50Q86XT4 487 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-203ENST00000409161 SCHIP1Q9P0W5 487 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-203ENST00000409161 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
SHANK2-203ENST00000409161 MSH6P52701 1360 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 ATF2P15336 505 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 ZNF174Q15697 407 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 NBPF9Q3BBW0 867 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
SHANK2-203ENST00000409161 ARHGEF18Q6ZSZ5 1173 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 PPWD1Q96BP3 646 aaKnown RBP13.31□□□□□ -0.28
SHANK2-203ENST00000409161 SRGAP2BP0DMP2 458 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 RAB44Q7Z6P3 723 aaPredicted RBP13.31□□□□□ -0.28
SHANK2-203ENST00000409161 ST13P4Q8IZP2 240 aaPredicted RBP13.31□□□□□ -0.28
SHANK2-203ENST00000409161 AKNAD1Q5T1N1 836 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 C10orf76Q5T2E6 689 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 TRIM11Q96F44 468 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 CDR2Q01850 454 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 NUB1Q9Y5A7 615 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 EYA3Q99504 573 aa13.31□□□□□ -0.28
SHANK2-203ENST00000409161 RBM6P78332 1123 aaKnown RBP13.3□□□□□ -0.28
SHANK2-203ENST00000409161 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
SHANK2-203ENST00000409161 PHLPP2Q6ZVD8 1323 aa13.3□□□□□ -0.28
SHANK2-203ENST00000409161 HGSO14964 777 aaPredicted RBP13.3□□□□□ -0.28
SHANK2-203ENST00000409161 KCNJ18B7U540 433 aa13.3□□□□□ -0.28
SHANK2-203ENST00000409161 S100BP04271 92 aaPredicted RBP13.3□□□□□ -0.28
SHANK2-203ENST00000409161 ABCD1P33897 745 aa13.3□□□□□ -0.28
SHANK2-203ENST00000409161 KCNJ12Q14500 433 aa13.3□□□□□ -0.28
SHANK2-203ENST00000409161 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
SHANK2-203ENST00000409161 RNF14Q9UBS8 474 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms