RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 GKAP1Q5VSY0 366 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 CDKAL1Q5VV42 579 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ARL6IP4Q66PJ3 421 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 KRT40Q6A162 431 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 C8orf74Q6P047 294 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 FOXR2Q6PJQ5 311 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 SHC4Q6S5L8 630 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 TTLL7Q6ZT98 887 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ANKRD13DQ6ZTN6 518 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 TOGARAM2Q6ZUX3 1019 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZNF589Q86UQ0 364 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 METTL16Q86W50 562 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 IQCA1Q86XH1 822 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ANKLE2Q86XL3 938 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 TTC5Q8N0Z6 440 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 LMBR1Q8WVP7 490 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 NECTIN2Q92692 538 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 FBXW7Q969H0 707 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 MIEF2Q96C03 454 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RBM33Q96EV2 1170 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 SGSM3Q96HU1 749 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 DHTKD1Q96HY7 919 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 SUCLG2Q96I99 432 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 IFT74Q96LB3 600 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC114Q96M63 670 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC42Q96M95 316 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 GDAP1L1Q96MZ0 367 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 MAP3K14Q99558 947 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 SH3GL3Q99963 347 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RNF26Q9BY78 433 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 HSD3B7Q9H2F3 369 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 KDM4CQ9H3R0 1056 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 VCPKMTQ9H867 229 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ATP6V0A4Q9HBG4 840 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 JADE2Q9NQC1 790 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 INCENPQ9NQS7 918 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 TOMM22Q9NS69 142 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 STIM2Q9P246 746 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 CPSF2Q9P2I0 782 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 LCMT1Q9UIC8 334 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 CAPN11Q9UMQ6 739 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 DIS3Q9Y2L1 958 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 TBX22Q9Y458 520 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RIMBP3CA6NJZ7 1639 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RIMBP3BA6NNM3 1639 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RIMBP3Q9UFD9 1639 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 TOPAZ1Q8N9V7 1692 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 METP08581 1390 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 TMEM2Q9UHN6 1383 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 A0A087WZG4 1122 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 A0A0G2JS52 829 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 GMNCA6NCL1 334 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 SOWAHDA6NJG2 315 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 LRRIQ3A6PVS8 624 aaPredicted RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 GOLGA8AA7E2F4 631 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 KCNJ18B7U540 433 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 E7ENQ6 273 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC188H7C350 402 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 EYA2O00167 538 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 FOXP2O15409 715 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 POLR2DO15514 142 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 RNMTO43148 476 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 SART1O43290 800 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 FOXO3O43524 673 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 GTPBP6O43824 516 aaPredicted RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 PHACTR2O75167 634 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 DNAJC8O75937 253 aaPredicted RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 ATP5HO75947 161 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRIM37O94972 964 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 SNRPA1P09661 255 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRIM21P19474 475 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 NR1D1P20393 614 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRHP20396 242 aaPredicted RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 FBLN1P23142 703 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 ANXA13P27216 316 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 CALML3P27482 149 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 MARCKSP29966 332 aaPredicted RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 ATP5DP30049 168 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 HNRNPH3P31942 346 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 KIF5BP33176 963 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 KRT2P35908 639 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 GGCXP38435 758 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 MDH1P40925 334 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 PRPHP41219 470 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 LIG3P49916 1009 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZNF131P52739 623 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 COPB1P53618 953 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 NAP1L1P55209 391 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 GUCY1B3Q02153 619 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 UBXN1Q04323 297 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 PTPN12Q05209 780 aaKnown RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 TFCP2Q12800 502 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 PNOCQ13519 176 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 KCNJ12Q14500 433 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 ITIH4Q14624 930 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 UBE3CQ15386 1083 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 PDCD2Q16342 344 aaPredicted RBP3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 MEA1Q16626 185 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 VWA3BQ502W6 1294 aa3.16□□□□□ -1.9
SNORD88.1-201ENST00000408684 LACTB2Q53H82 288 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms