RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
GDPD3-202ENST00000406256 COL9A3Q14050 684 aaPredicted RBP18.81■□□□□ 0.6
GDPD3-202ENST00000406256 COL13A1Q5TAT6 717 aaPredicted RBP18.81■□□□□ 0.6
GDPD3-202ENST00000406256 RCSD1Q6JBY9 416 aa18.81■□□□□ 0.6
GDPD3-202ENST00000406256 CPA4Q9UI42 421 aa18.81■□□□□ 0.6
GDPD3-202ENST00000406256 TSPY2A6NKD2 308 aa18.8■□□□□ 0.6
GDPD3-202ENST00000406256 NECTIN1Q15223 517 aa18.8■□□□□ 0.6
GDPD3-202ENST00000406256 RRP12Q5JTH9 1297 aaKnown RBP18.8■□□□□ 0.6
GDPD3-202ENST00000406256 CATSPERGQ6ZRH7 1159 aa18.8■□□□□ 0.6
GDPD3-202ENST00000406256 P2RX7Q99572 595 aaKnown RBP18.8■□□□□ 0.6
GDPD3-202ENST00000406256 RNF41Q9H4P4 317 aaPredicted RBP18.8■□□□□ 0.6
GDPD3-202ENST00000406256 ANO2Q9NQ90 1003 aa18.8■□□□□ 0.6
GDPD3-202ENST00000406256 TCP11L1Q9NUJ3 509 aa18.8■□□□□ 0.6
GDPD3-202ENST00000406256 CLIP2Q9UDT6 1046 aa18.8■□□□□ 0.6
GDPD3-202ENST00000406256 PLXNB2O15031 1838 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 B4E1Z4 1266 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 PEX10O60683 326 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 FKTNO75072 461 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 TTLL1O95922 423 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 CTGFP29279 349 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 SPICE1Q8N0Z3 855 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 LPAR1Q92633 364 aa18.79■□□□□ 0.6
GDPD3-202ENST00000406256 RPAP3Q9H6T3 665 aaPredicted RBP18.79■□□□□ 0.6
GDPD3-202ENST00000406256 BRCA2P51587 3418 aa18.78■□□□□ 0.6
GDPD3-202ENST00000406256 RASGRP2Q7LDG7 609 aa18.78■□□□□ 0.6
GDPD3-202ENST00000406256 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
GDPD3-202ENST00000406256 SH2D4AQ9H788 454 aa18.78■□□□□ 0.6
GDPD3-202ENST00000406256 TOMM22Q9NS69 142 aa18.78■□□□□ 0.6
GDPD3-202ENST00000406256 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
GDPD3-202ENST00000406256 SYNPO2Q9UMS6 1093 aa18.78■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L15C9J2P7 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L13C9JLJ4 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L11C9JVI0 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L18D6R9N7 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L22D6RA61 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L17D6RBQ6 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L19D6RCP7 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L20D6RJB6 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 E7EWF7 191 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 SLC27A2O14975 620 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 KDM4AO75164 1064 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 NDUFB10O96000 172 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 HERVK_113P62684 666 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 SP3Q02447 781 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 USP17L24Q0WX57 530 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 PABPC4Q13310 644 aaKnown RBP eCLIP18.77■□□□□ 0.6
GDPD3-202ENST00000406256 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 ARHGAP39Q9C0H5 1083 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 TXNRD2Q9NNW7 524 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 ZSWIM5Q9P217 1185 aa18.77■□□□□ 0.6
GDPD3-202ENST00000406256 SPDYE16A6NNV3 312 aaPredicted RBP18.76■□□□□ 0.59
GDPD3-202ENST00000406256 F5H6K3 240 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 WDR46O15213 610 aaKnown RBP18.76■□□□□ 0.59
GDPD3-202ENST00000406256 CNMDO75829 334 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 OSBPP22059 807 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 KLRC3Q07444 240 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 CREB3L3Q68CJ9 461 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 LBX2Q6XYB7 198 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 KIAA1211Q6ZU35 1233 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 GMCL1P1Q8NEA9 526 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 CD99L2Q8TCZ2 262 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 ESR2Q92731 530 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 NUP88Q99567 741 aaPredicted RBP18.76■□□□□ 0.59
GDPD3-202ENST00000406256 RBPJLQ9UBG7 517 aa18.76■□□□□ 0.59
GDPD3-202ENST00000406256 SMCHD1A6NHR9 2005 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 NT5C2P49902 561 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 IRX3P78415 501 aaPredicted RBP18.75■□□□□ 0.59
GDPD3-202ENST00000406256 CASC1Q6TDU7 716 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 SMCR8Q8TEV9 937 aaPredicted RBP18.75■□□□□ 0.59
GDPD3-202ENST00000406256 TMEM47Q9BQJ4 181 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 GOPCQ9HD26 462 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 FBXO28Q9NVF7 368 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 MORF4L1Q9UBU8 362 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
GDPD3-202ENST00000406256 ANTXR2P58335 489 aa18.74■□□□□ 0.59
GDPD3-202ENST00000406256 LACTBP83111 547 aaPredicted RBP18.74■□□□□ 0.59
GDPD3-202ENST00000406256 FAM110CQ1W6H9 321 aa18.74■□□□□ 0.59
GDPD3-202ENST00000406256 FAM83BQ5T0W9 1011 aa18.74■□□□□ 0.59
GDPD3-202ENST00000406256 MB21D2Q8IYB1 491 aaPredicted RBP18.74■□□□□ 0.59
GDPD3-202ENST00000406256 RASEFQ8IZ41 740 aa18.74■□□□□ 0.59
GDPD3-202ENST00000406256 ANKRD13CQ8N6S4 541 aa18.74■□□□□ 0.59
GDPD3-202ENST00000406256 KRT23Q9C075 422 aa18.74■□□□□ 0.59
GDPD3-202ENST00000406256 CNNM2Q9H8M5 875 aa18.74■□□□□ 0.59
GDPD3-202ENST00000406256 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
GDPD3-202ENST00000406256 SEC23AQ15436 765 aa18.73■□□□□ 0.59
GDPD3-202ENST00000406256 ENAHQ8N8S7 591 aaPredicted RBP18.73■□□□□ 0.59
GDPD3-202ENST00000406256 ANKS1AQ92625 1134 aa18.73■□□□□ 0.59
GDPD3-202ENST00000406256 KCNB2Q92953 911 aa18.73■□□□□ 0.59
GDPD3-202ENST00000406256 ADAMTS5Q9UNA0 930 aa18.73■□□□□ 0.59
GDPD3-202ENST00000406256 DSG3P32926 999 aa18.72■□□□□ 0.59
GDPD3-202ENST00000406256 Q3C1V9 767 aa18.72■□□□□ 0.59
GDPD3-202ENST00000406256 ERO1AQ96HE7 468 aa18.72■□□□□ 0.59
GDPD3-202ENST00000406256 TANGO6Q9C0B7 1094 aa18.72■□□□□ 0.59
GDPD3-202ENST00000406256 BTBD7Q9P203 1132 aa18.72■□□□□ 0.59
GDPD3-202ENST00000406256 MYPNQ86TC9 1320 aa18.72■□□□□ 0.59
GDPD3-202ENST00000406256 ZNFX1Q9P2E3 1918 aaKnown RBP18.71■□□□□ 0.59
GDPD3-202ENST00000406256 TOP1P11387 765 aaKnown RBP18.71■□□□□ 0.59
GDPD3-202ENST00000406256 PPP4R3BQ5MIZ7 849 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms