RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 PRKG1Q13976 671 aa25.7■■□□□ 1.7
EPCAM-202ENST00000405271 CATIPQ7Z7H3 387 aa25.7■■□□□ 1.7
EPCAM-202ENST00000405271 GTF3C6Q969F1 213 aa25.7■■□□□ 1.7
EPCAM-202ENST00000405271 NAP1L2Q9ULW6 460 aaPredicted RBP25.7■■□□□ 1.7
EPCAM-202ENST00000405271 CALM1P0DP23 149 aa25.69■■□□□ 1.7
EPCAM-202ENST00000405271 CALM2P0DP24 149 aa25.69■■□□□ 1.7
EPCAM-202ENST00000405271 CALM3P0DP25 149 aa25.69■■□□□ 1.7
EPCAM-202ENST00000405271 ICA1Q05084 483 aa25.69■■□□□ 1.7
EPCAM-202ENST00000405271 SEPT2Q15019 361 aa25.69■■□□□ 1.7
EPCAM-202ENST00000405271 TMEM47Q9BQJ4 181 aa25.69■■□□□ 1.7
EPCAM-202ENST00000405271 NYAP2Q9P242 653 aa25.69■■□□□ 1.7
EPCAM-202ENST00000405271 PPP1R12BO60237 982 aaPredicted RBP25.68■■□□□ 1.7
EPCAM-202ENST00000405271 SHROOM1Q2M3G4 852 aaPredicted RBP25.68■■□□□ 1.7
EPCAM-202ENST00000405271 PNMA1Q8ND90 353 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 WRNIP1Q96S55 665 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 SYNPO2Q9UMS6 1093 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 FZD1Q9UP38 647 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 METAP2P50579 478 aaKnown RBP eCLIP25.68■■□□□ 1.7
EPCAM-202ENST00000405271 JAG1P78504 1218 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 STK3Q13188 491 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 RAB3GAP1Q15042 981 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 ARMC9Q7Z3E5 817 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 MICU3Q86XE3 530 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 HPS5Q9UPZ3 1129 aa25.68■■□□□ 1.7
EPCAM-202ENST00000405271 HSP90AA1P07900 732 aaKnown RBP25.67■■□□□ 1.7
EPCAM-202ENST00000405271 SLC10A3P09131 477 aa25.67■■□□□ 1.7
EPCAM-202ENST00000405271 PPP2R5BQ15173 497 aa25.67■■□□□ 1.7
EPCAM-202ENST00000405271 CLEC10AQ8IUN9 316 aa25.67■■□□□ 1.7
EPCAM-202ENST00000405271 SCYL3Q8IZE3 742 aa25.67■■□□□ 1.7
EPCAM-202ENST00000405271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.67■■□□□ 1.7
EPCAM-202ENST00000405271 INTS4Q96HW7 963 aaKnown RBP25.67■■□□□ 1.7
EPCAM-202ENST00000405271 PARP14Q460N5 1801 aa25.67■■□□□ 1.7
EPCAM-202ENST00000405271 GOLGA8AA7E2F4 631 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 ST3GAL1Q11201 340 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 SCRN1Q12765 414 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 NOL9Q5SY16 702 aaKnown RBP25.66■■□□□ 1.7
EPCAM-202ENST00000405271 LDLRAD1Q5T700 205 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 COL13A1Q5TAT6 717 aaPredicted RBP25.66■■□□□ 1.7
EPCAM-202ENST00000405271 CCDC83Q8IWF9 413 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 MKL1Q969V6 931 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 MAP3K14Q99558 947 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 BEGAINQ9BUH8 593 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 ARHGEF10LQ9HCE6 1279 aa25.66■■□□□ 1.7
EPCAM-202ENST00000405271 USP2O75604 605 aaPredicted RBP25.65■■□□□ 1.7
EPCAM-202ENST00000405271 EEF2P13639 858 aaKnown RBP25.65■■□□□ 1.7
EPCAM-202ENST00000405271 INPP5BP32019 993 aa25.65■■□□□ 1.7
EPCAM-202ENST00000405271 IREB2P48200 963 aaKnown RBP25.65■■□□□ 1.7
EPCAM-202ENST00000405271 TROAPQ12815 778 aa25.65■■□□□ 1.7
EPCAM-202ENST00000405271 RASAL3Q86YV0 1011 aa25.65■■□□□ 1.7
EPCAM-202ENST00000405271 NECAB1Q8N987 351 aa25.65■■□□□ 1.7
EPCAM-202ENST00000405271 MYL10Q9BUA6 226 aa25.65■■□□□ 1.7
EPCAM-202ENST00000405271 CLIP2Q9UDT6 1046 aa25.65■■□□□ 1.7
EPCAM-202ENST00000405271 THSD7BQ9C0I4 1608 aa25.64■■□□□ 1.7
EPCAM-202ENST00000405271 DHX16O60231 1041 aaKnown RBP25.64■■□□□ 1.7
EPCAM-202ENST00000405271 CTCFP49711 727 aaPredicted RBP25.64■■□□□ 1.7
EPCAM-202ENST00000405271 KIF23Q02241 960 aaPredicted RBP25.64■■□□□ 1.7
EPCAM-202ENST00000405271 MAP3K11Q16584 847 aa25.64■■□□□ 1.7
EPCAM-202ENST00000405271 NUP133Q8WUM0 1156 aa25.64■■□□□ 1.7
EPCAM-202ENST00000405271 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.64■■□□□ 1.7
EPCAM-202ENST00000405271 LOC285556D6RIA3 1793 aa25.64■■□□□ 1.69
EPCAM-202ENST00000405271 CCDC196A0A1B0GTZ2 297 aa25.63■■□□□ 1.69
EPCAM-202ENST00000405271 SLC4A3P48751 1232 aa25.63■■□□□ 1.69
EPCAM-202ENST00000405271 RTN1Q16799 776 aa25.63■■□□□ 1.69
EPCAM-202ENST00000405271 LRRC47Q8N1G4 583 aaKnown RBP25.63■■□□□ 1.69
EPCAM-202ENST00000405271 SH2D4AQ9H788 454 aa25.63■■□□□ 1.69
EPCAM-202ENST00000405271 RBM28Q9NW13 759 aaKnown RBP25.63■■□□□ 1.69
EPCAM-202ENST00000405271 RXRAP19793 462 aa25.63■■□□□ 1.69
EPCAM-202ENST00000405271 CCT2P78371 535 aaKnown RBP25.63■■□□□ 1.69
EPCAM-202ENST00000405271 ATP2B2Q01814 1243 aa25.63■■□□□ 1.69
EPCAM-202ENST00000405271 FANCBQ8NB91 859 aa25.63■■□□□ 1.69
EPCAM-202ENST00000405271 CTCFLQ8NI51 663 aaPredicted RBP25.63■■□□□ 1.69
EPCAM-202ENST00000405271 LLPHQ9BRT6 129 aaKnown RBP25.63■■□□□ 1.69
EPCAM-202ENST00000405271 RAB11FIP4Q86YS3 637 aa25.62■■□□□ 1.69
EPCAM-202ENST00000405271 PICK1Q9NRD5 415 aa25.62■■□□□ 1.69
EPCAM-202ENST00000405271 USP17L5A8MUK1 530 aa25.61■■□□□ 1.69
EPCAM-202ENST00000405271 KIF5BP33176 963 aa25.61■■□□□ 1.69
EPCAM-202ENST00000405271 LBX1P52954 281 aa25.61■■□□□ 1.69
EPCAM-202ENST00000405271 MAP3K9P80192 1104 aa25.61■■□□□ 1.69
EPCAM-202ENST00000405271 GRM4Q14833 912 aa25.61■■□□□ 1.69
EPCAM-202ENST00000405271 CPLX2Q6PUV4 134 aaKnown RBP25.61■■□□□ 1.69
EPCAM-202ENST00000405271 SIAH1Q8IUQ4 282 aa25.61■■□□□ 1.69
EPCAM-202ENST00000405271 ZKSCAN4Q969J2 545 aaPredicted RBP25.61■■□□□ 1.69
EPCAM-202ENST00000405271 AS3MTQ9HBK9 375 aa25.61■■□□□ 1.69
EPCAM-202ENST00000405271 NCOA5Q9HCD5 579 aaKnown RBP25.61■■□□□ 1.69
EPCAM-202ENST00000405271 CSADQ9Y600 493 aa25.61■■□□□ 1.69
EPCAM-202ENST00000405271 CCDC144CPQ8IYA2 1237 aa25.6■■□□□ 1.69
EPCAM-202ENST00000405271 ANKRD13AQ8IZ07 590 aa25.6■■□□□ 1.69
EPCAM-202ENST00000405271 GMCL1P1Q8NEA9 526 aa25.6■■□□□ 1.69
EPCAM-202ENST00000405271 TMX2Q9Y320 296 aa25.6■■□□□ 1.69
EPCAM-202ENST00000405271 BAZ2BQ9UIF8 2168 aaKnown RBP25.6■■□□□ 1.69
EPCAM-202ENST00000405271 CPLX1O14810 134 aa25.59■■□□□ 1.69
EPCAM-202ENST00000405271 CDKL5O76039 1030 aa25.59■■□□□ 1.69
EPCAM-202ENST00000405271 HSPA8P11142 646 aaKnown RBP25.59■■□□□ 1.69
EPCAM-202ENST00000405271 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.59■■□□□ 1.69
EPCAM-202ENST00000405271 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.59■■□□□ 1.69
EPCAM-202ENST00000405271 UNCXA6NJT0 531 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 CA12O43570 354 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 SNHG28P0DPA3 235 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 PDHBP11177 359 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 CDC27P30260 824 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms